==1392551== Memcheck, a memory error detector ==1392551== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1392551== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1392551== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1392551== Parent PID: 1372398 ==1392551== ==1392551== ==1392551== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1392551== Open file descriptor 12: ==1392551== at 0x109CE22D: pipe (pipe.c:29) ==1392551== by 0x193EE07D: ??? ==1392551== by 0x149504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1392551== by 0x102D8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1392551== by 0x10271D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1392551== by 0xEF68D38: PetscInitialize (pinit.c:924) ==1392551== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1392551== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1392551== by 0x232E47: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1392551== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1392551== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1392551== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1392551== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1392551== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1392551== ==1392551== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1392551== at 0x109D2BCC: __open_nocancel (open64_nocancel.c:39) ==1392551== by 0x10956C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1392551== by 0xEE12822: ??? ==1392551== by 0xEE1296F: ??? ==1392551== by 0x149F56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1392551== by 0x149F5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1392551== by 0x149AB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1392551== by 0x149502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1392551== by 0x102D8418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1392551== by 0x10271D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1392551== by 0xEF68D38: PetscInitialize (pinit.c:924) ==1392551== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1392551== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1392551== by 0x232E47: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==1392551== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1392551== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1392551== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1392551== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1392551== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==1392551== ==1392551== Open file descriptor 116: ==1392551== ==1392551== ==1392551== Open file descriptor 111: ==1392551== ==1392551== ==1392551== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==1392551== ==1392551== ==1392551== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1392551== ==1392551== ==1392551== ==1392551== HEAP SUMMARY: ==1392551== in use at exit: 700,720 bytes in 9,374 blocks ==1392551== total heap usage: 3,331,443 allocs, 3,322,069 frees, 1,615,402,366 bytes allocated ==1392551== ==1392551== LEAK SUMMARY: ==1392551== definitely lost: 0 bytes in 0 blocks ==1392551== indirectly lost: 0 bytes in 0 blocks ==1392551== possibly lost: 0 bytes in 0 blocks ==1392551== still reachable: 56 bytes in 3 blocks ==1392551== suppressed: 700,664 bytes in 9,371 blocks ==1392551== Reachable blocks (those to which a pointer was found) are not shown. ==1392551== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1392551== ==1392551== For lists of detected and suppressed errors, rerun with: -s ==1392551== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)