==1373381== Memcheck, a memory error detector ==1373381== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1373381== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1373381== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/pde/test/TestHdf5Converters -malloc_debug -malloc_dump -memory_info ==1373381== Parent PID: 1372398 ==1373381== ==1373381== ==1373381== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1373381== Open file descriptor 12: ==1373381== at 0x6C4522D: pipe (pipe.c:29) ==1373381== by 0xFE1C07D: ??? ==1373381== by 0xBF534CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373381== by 0x86DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373381== by 0x8677D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373381== by 0x6FB7D38: PetscInitialize (pinit.c:924) ==1373381== by 0x61F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373381== by 0x61F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373381== by 0x12A538: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373381== by 0x125A9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373381== by 0x128602: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373381== by 0x1284FD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373381== by 0x128B11: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373381== by 0x1242A0: main (TestHdf5Converters.cpp:18) ==1373381== ==1373381== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1373381== at 0x6C49BCC: __open_nocancel (open64_nocancel.c:39) ==1373381== by 0x6BCDC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1373381== by 0x622E822: ??? ==1373381== by 0x622E96F: ??? ==1373381== by 0xBFF86DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373381== by 0xBFF8938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373381== by 0xBFAE922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1373381== by 0xBF532DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1373381== by 0x86DE418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373381== by 0x8677D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1373381== by 0x6FB7D38: PetscInitialize (pinit.c:924) ==1373381== by 0x61F658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1373381== by 0x61F65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1373381== by 0x12A538: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1373381== by 0x125A9D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1373381== by 0x128602: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1373381== by 0x1284FD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1373381== by 0x128B11: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1373381== by 0x1242A0: main (TestHdf5Converters.cpp:18) ==1373381== ==1373381== Open file descriptor 116: ==1373381== ==1373381== ==1373381== Open file descriptor 111: ==1373381== ==1373381== ==1373381== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHdf5Converters_valgrind.txt ==1373381== ==1373381== ==1373381== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1373381== ==1373381== ==1373381== ==1373381== HEAP SUMMARY: ==1373381== in use at exit: 700,679 bytes in 9,377 blocks ==1373381== total heap usage: 207,370 allocs, 197,993 frees, 1,409,448,386 bytes allocated ==1373381== ==1373381== LEAK SUMMARY: ==1373381== definitely lost: 0 bytes in 0 blocks ==1373381== indirectly lost: 0 bytes in 0 blocks ==1373381== possibly lost: 0 bytes in 0 blocks ==1373381== still reachable: 24 bytes in 2 blocks ==1373381== suppressed: 700,655 bytes in 9,375 blocks ==1373381== Reachable blocks (those to which a pointer was found) are not shown. ==1373381== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1373381== ==1373381== For lists of detected and suppressed errors, rerun with: -s ==1373381== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)