==1374082== Memcheck, a memory error detector ==1374082== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1374082== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1374082== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1374082== Parent PID: 1372398 ==1374082== ==1374082== ==1374082== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1374082== Open file descriptor 12: ==1374082== at 0xDD1F22D: pipe (pipe.c:29) ==1374082== by 0x17B0E07D: ??? ==1374082== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1374082== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374082== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374082== by 0xE64BD38: PetscInitialize (pinit.c:924) ==1374082== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1374082== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1374082== by 0x30238C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1374082== by 0x2F7593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1374082== by 0x2FBF54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1374082== by 0x2FBDF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1374082== by 0x2FC48B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1374082== by 0x2F5880: main (TestMeshBasedCellPopulation.cpp:19) ==1374082== ==1374082== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1374082== at 0xDD23BCC: __open_nocancel (open64_nocancel.c:39) ==1374082== by 0xDCA7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1374082== by 0xD531822: ??? ==1374082== by 0xD53196F: ??? ==1374082== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374082== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374082== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374082== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1374082== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374082== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374082== by 0xE64BD38: PetscInitialize (pinit.c:924) ==1374082== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1374082== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1374082== by 0x30238C: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1374082== by 0x2F7593: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1374082== by 0x2FBF54: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1374082== by 0x2FBDF4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1374082== by 0x2FC48B: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1374082== by 0x2F5880: main (TestMeshBasedCellPopulation.cpp:19) ==1374082== ==1374082== Open file descriptor 116: ==1374082== ==1374082== ==1374082== Open file descriptor 111: ==1374082== ==1374082== ==1374082== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulation_valgrind.txt ==1374082== ==1374082== ==1374082== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1374082== ==1374082== ==1374082== ==1374082== HEAP SUMMARY: ==1374082== in use at exit: 700,775 bytes in 9,378 blocks ==1374082== total heap usage: 144,090 allocs, 134,712 frees, 1,381,289,087 bytes allocated ==1374082== ==1374082== LEAK SUMMARY: ==1374082== definitely lost: 0 bytes in 0 blocks ==1374082== indirectly lost: 0 bytes in 0 blocks ==1374082== possibly lost: 0 bytes in 0 blocks ==1374082== still reachable: 56 bytes in 3 blocks ==1374082== suppressed: 700,719 bytes in 9,375 blocks ==1374082== Reachable blocks (those to which a pointer was found) are not shown. ==1374082== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1374082== ==1374082== For lists of detected and suppressed errors, rerun with: -s ==1374082== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)