==1374753== Memcheck, a memory error detector ==1374753== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==1374753== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==1374753== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithCaBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==1374753== Parent PID: 1372398 ==1374753== ==1374753== ==1374753== FILE DESCRIPTORS: 9 open (3 std) at exit. ==1374753== Open file descriptor 12: ==1374753== at 0xE19B22D: pipe (pipe.c:29) ==1374753== by 0x17B0D07D: ??? ==1374753== by 0x132314CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1374753== by 0xFE37418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374753== by 0xFDD0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374753== by 0xEAC7D38: PetscInitialize (pinit.c:924) ==1374753== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1374753== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1374753== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1374753== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1374753== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1374753== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1374753== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1374753== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1374753== ==1374753== Open file descriptor 8: /dev/shm/open_mpi.0000 ==1374753== at 0xE19FBCC: __open_nocancel (open64_nocancel.c:39) ==1374753== by 0xE123C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==1374753== by 0xD531822: ??? ==1374753== by 0xD53196F: ??? ==1374753== by 0x132D66DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374753== by 0x132D6938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374753== by 0x1328C922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==1374753== by 0x132312DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==1374753== by 0xFE37418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374753== by 0xFDD0D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==1374753== by 0xEAC7D38: PetscInitialize (pinit.c:924) ==1374753== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==1374753== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==1374753== by 0x1DFCCE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==1374753== by 0x1D7FD3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==1374753== by 0x1DB8B8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==1374753== by 0x1DB758: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==1374753== by 0x1DBDEF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==1374753== by 0x1D62C0: main (TestOnLatticeSimulationWithCaBasedCellPopulation.cpp:19) ==1374753== ==1374753== Open file descriptor 116: ==1374753== ==1374753== ==1374753== Open file descriptor 111: ==1374753== ==1374753== ==1374753== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithCaBasedCellPopulation_valgrind.txt ==1374753== ==1374753== ==1374753== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==1374753== ==1374753== ==1374753== ==1374753== HEAP SUMMARY: ==1374753== in use at exit: 700,704 bytes in 9,374 blocks ==1374753== total heap usage: 6,911,696 allocs, 6,902,322 frees, 8,038,669,110 bytes allocated ==1374753== ==1374753== LEAK SUMMARY: ==1374753== definitely lost: 0 bytes in 0 blocks ==1374753== indirectly lost: 0 bytes in 0 blocks ==1374753== possibly lost: 0 bytes in 0 blocks ==1374753== still reachable: 56 bytes in 3 blocks ==1374753== suppressed: 700,648 bytes in 9,371 blocks ==1374753== Reachable blocks (those to which a pointer was found) are not shown. ==1374753== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==1374753== ==1374753== For lists of detected and suppressed errors, rerun with: -s ==1374753== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)