==97064== Memcheck, a memory error detector ==97064== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==97064== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==97064== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/global/test/TestCitations -malloc_debug -malloc_dump -memory_info ==97064== Parent PID: 97061 ==97064== ==97064== ==97064== FILE DESCRIPTORS: 9 open (3 std) at exit. ==97064== Open file descriptor 12: ==97064== at 0x4CC422D: pipe (pipe.c:29) ==97064== by 0xAED807D: ??? ==97064== by 0x89EB4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==97064== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==97064== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==97064== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==97064== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==97064== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==97064== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==97064== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==97064== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==97064== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==97064== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==97064== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==97064== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==97064== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==97064== by 0x119C80: main (TestCitations.cpp:18) ==97064== ==97064== Open file descriptor 8: /dev/shm/open_mpi.0000 ==97064== at 0x4CC8BCC: __open_nocancel (open64_nocancel.c:39) ==97064== by 0x4C4CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==97064== by 0x4944822: ??? ==97064== by 0x494496F: ??? ==97064== by 0x8A906DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==97064== by 0x8A90938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==97064== by 0x8A46922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==97064== by 0x89EB2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==97064== by 0x629E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==97064== by 0x6237D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==97064== by 0x4F2ED38: PetscInitialize (pinit.c:924) ==97064== by 0x490C58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==97064== by 0x490C5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==97064== by 0x122D2B: TestCitations::TestChasteCitation() (TestCitations.hpp:72) ==97064== by 0x1235D8: TestDescription_TestCitations_TestChasteCitation::runTest() (TestCitations.cpp:30) ==97064== by 0x11ACB4: CxxTest::RealTestDescription::run() (RealDescriptions.cpp:96) ==97064== by 0x11DFF0: CxxTest::TestRunner::runTest(CxxTest::TestDescription&) (TestRunner.h:74) ==97064== by 0x11DED5: CxxTest::TestRunner::runSuite(CxxTest::SuiteDescription&) (TestRunner.h:61) ==97064== by 0x11DD7B: CxxTest::TestRunner::runWorld() (TestRunner.h:46) ==97064== by 0x11DC3D: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==97064== by 0x11E251: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==97064== by 0x119C80: main (TestCitations.cpp:18) ==97064== ==97064== Open file descriptor 114: ==97064== ==97064== ==97064== Open file descriptor 111: ==97064== ==97064== ==97064== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCitations_valgrind.txt ==97064== ==97064== ==97064== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==97064== ==97064== ==97064== ==97064== HEAP SUMMARY: ==97064== in use at exit: 700,269 bytes in 9,377 blocks ==97064== total heap usage: 47,404 allocs, 38,027 frees, 1,353,322,854 bytes allocated ==97064== ==97064== LEAK SUMMARY: ==97064== definitely lost: 0 bytes in 0 blocks ==97064== indirectly lost: 0 bytes in 0 blocks ==97064== possibly lost: 0 bytes in 0 blocks ==97064== still reachable: 24 bytes in 2 blocks ==97064== suppressed: 700,245 bytes in 9,375 blocks ==97064== Reachable blocks (those to which a pointer was found) are not shown. ==97064== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==97064== ==97064== For lists of detected and suppressed errors, rerun with: -s ==97064== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 34 from 34)