==98608== Memcheck, a memory error detector ==98608== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==98608== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==98608== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestGoldbeter1991OdeSystem -malloc_debug -malloc_dump -memory_info ==98608== Parent PID: 97061 ==98608== ==98608== ==98608== FILE DESCRIPTORS: 9 open (3 std) at exit. ==98608== Open file descriptor 12: ==98608== at 0xDABC22D: pipe (pipe.c:29) ==98608== by 0x17B0E07D: ??? ==98608== by 0x120AC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98608== by 0xD70B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98608== by 0xD6A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98608== by 0xC39BD38: PetscInitialize (pinit.c:924) ==98608== by 0xC20D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98608== by 0xC20D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98608== by 0x123F93: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==98608== by 0x11F543: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98608== by 0x121A5E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98608== by 0x12195A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98608== by 0x121F6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98608== by 0x11DD45: main (TestGoldbeter1991OdeSystem.cpp:18) ==98608== ==98608== Open file descriptor 8: /dev/shm/open_mpi.0000 ==98608== at 0xDAC0BCC: __open_nocancel (open64_nocancel.c:39) ==98608== by 0xDA44C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==98608== by 0xC245822: ??? ==98608== by 0xC24596F: ??? ==98608== by 0x121516DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98608== by 0x12151938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98608== by 0x12107922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98608== by 0x120AC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98608== by 0xD70B418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98608== by 0xD6A4D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98608== by 0xC39BD38: PetscInitialize (pinit.c:924) ==98608== by 0xC20D58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98608== by 0xC20D5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98608== by 0x123F93: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==98608== by 0x11F543: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98608== by 0x121A5E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98608== by 0x12195A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98608== by 0x121F6D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98608== by 0x11DD45: main (TestGoldbeter1991OdeSystem.cpp:18) ==98608== ==98608== Open file descriptor 114: ==98608== ==98608== ==98608== Open file descriptor 111: ==98608== ==98608== ==98608== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestGoldbeter1991OdeSystem_valgrind.txt ==98608== ==98608== ==98608== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==98608== ==98608== ==98608== ==98608== HEAP SUMMARY: ==98608== in use at exit: 700,733 bytes in 9,377 blocks ==98608== total heap usage: 64,471 allocs, 55,094 frees, 1,354,882,222 bytes allocated ==98608== ==98608== LEAK SUMMARY: ==98608== definitely lost: 0 bytes in 0 blocks ==98608== indirectly lost: 0 bytes in 0 blocks ==98608== possibly lost: 0 bytes in 0 blocks ==98608== still reachable: 24 bytes in 2 blocks ==98608== suppressed: 700,709 bytes in 9,375 blocks ==98608== Reachable blocks (those to which a pointer was found) are not shown. ==98608== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==98608== ==98608== For lists of detected and suppressed errors, rerun with: -s ==98608== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)