==98742== Memcheck, a memory error detector ==98742== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==98742== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==98742== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==98742== Parent PID: 97061 ==98742== ==98742== ==98742== FILE DESCRIPTORS: 9 open (3 std) at exit. ==98742== Open file descriptor 12: ==98742== at 0xDCD722D: pipe (pipe.c:29) ==98742== by 0x17B0E07D: ??? ==98742== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98742== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98742== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98742== by 0xE562D38: PetscInitialize (pinit.c:924) ==98742== by 0xD59858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98742== by 0xD5985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98742== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==98742== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98742== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98742== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98742== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98742== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==98742== ==98742== Open file descriptor 8: /dev/shm/open_mpi.0000 ==98742== at 0xDCDBBCC: __open_nocancel (open64_nocancel.c:39) ==98742== by 0xDC5FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==98742== by 0xD5D0822: ??? ==98742== by 0xD5D096F: ??? ==98742== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98742== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98742== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==98742== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==98742== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98742== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==98742== by 0xE562D38: PetscInitialize (pinit.c:924) ==98742== by 0xD59858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==98742== by 0xD5985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==98742== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==98742== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==98742== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==98742== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==98742== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==98742== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==98742== ==98742== Open file descriptor 114: ==98742== ==98742== ==98742== Open file descriptor 111: ==98742== ==98742== ==98742== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==98742== ==98742== ==98742== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==98742== ==98742== ==98742== ==98742== HEAP SUMMARY: ==98742== in use at exit: 700,700 bytes in 9,374 blocks ==98742== total heap usage: 20,192,131 allocs, 20,182,757 frees, 2,577,753,662 bytes allocated ==98742== ==98742== LEAK SUMMARY: ==98742== definitely lost: 0 bytes in 0 blocks ==98742== indirectly lost: 0 bytes in 0 blocks ==98742== possibly lost: 0 bytes in 0 blocks ==98742== still reachable: 56 bytes in 3 blocks ==98742== suppressed: 700,644 bytes in 9,371 blocks ==98742== Reachable blocks (those to which a pointer was found) are not shown. ==98742== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==98742== ==98742== For lists of detected and suppressed errors, rerun with: -s ==98742== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)