==116883== Memcheck, a memory error detector ==116883== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==116883== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==116883== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestOdeBasedCellCycleModelsForCrypt -malloc_debug -malloc_dump -memory_info ==116883== Parent PID: 97061 ==116883== ==116883== ==116883== FILE DESCRIPTORS: 9 open (3 std) at exit. ==116883== Open file descriptor 12: ==116883== at 0xF6E222D: pipe (pipe.c:29) ==116883== by 0x193EE07D: ??? ==116883== by 0x1398F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==116883== by 0xEFEC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116883== by 0xEF85D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116883== by 0xDC7CD38: PetscInitialize (pinit.c:924) ==116883== by 0xDAEE58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==116883== by 0xDAEE5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==116883== by 0x19DA6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==116883== by 0x1941B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==116883== by 0x19785C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==116883== by 0x1976FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==116883== by 0x197D93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==116883== by 0x18FFA0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==116883== ==116883== Open file descriptor 8: /dev/shm/open_mpi.0000 ==116883== at 0xF6E6BCC: __open_nocancel (open64_nocancel.c:39) ==116883== by 0xF66AC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==116883== by 0xDB26822: ??? ==116883== by 0xDB2696F: ??? ==116883== by 0x13A346DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116883== by 0x13A34938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116883== by 0x139EA922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116883== by 0x1398F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==116883== by 0xEFEC418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116883== by 0xEF85D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116883== by 0xDC7CD38: PetscInitialize (pinit.c:924) ==116883== by 0xDAEE58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==116883== by 0xDAEE5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==116883== by 0x19DA6D: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==116883== by 0x1941B7: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==116883== by 0x19785C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==116883== by 0x1976FC: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==116883== by 0x197D93: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==116883== by 0x18FFA0: main (TestOdeBasedCellCycleModelsForCrypt.cpp:19) ==116883== ==116883== Open file descriptor 114: ==116883== ==116883== ==116883== Open file descriptor 111: ==116883== ==116883== ==116883== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOdeBasedCellCycleModelsForCrypt_valgrind.txt ==116883== ==116883== ==116883== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==116883== ==116883== ==116883== ==116883== HEAP SUMMARY: ==116883== in use at exit: 700,850 bytes in 9,379 blocks ==116883== total heap usage: 863,114 allocs, 853,735 frees, 1,475,812,371 bytes allocated ==116883== ==116883== LEAK SUMMARY: ==116883== definitely lost: 0 bytes in 0 blocks ==116883== indirectly lost: 0 bytes in 0 blocks ==116883== possibly lost: 0 bytes in 0 blocks ==116883== still reachable: 120 bytes in 4 blocks ==116883== suppressed: 700,730 bytes in 9,375 blocks ==116883== Reachable blocks (those to which a pointer was found) are not shown. ==116883== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==116883== ==116883== For lists of detected and suppressed errors, rerun with: -s ==116883== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)