==99356== Memcheck, a memory error detector ==99356== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==99356== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==99356== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==99356== Parent PID: 97061 ==99356== ==99356== ==99356== FILE DESCRIPTORS: 9 open (3 std) at exit. ==99356== Open file descriptor 12: ==99356== at 0xF1D422D: pipe (pipe.c:29) ==99356== by 0x17B0C07D: ??? ==99356== by 0x130704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==99356== by 0xE9F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99356== by 0xE990D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99356== by 0xD687D38: PetscInitialize (pinit.c:924) ==99356== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==99356== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==99356== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==99356== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==99356== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==99356== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==99356== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==99356== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==99356== ==99356== Open file descriptor 8: /dev/shm/open_mpi.0000 ==99356== at 0xF1D8BCC: __open_nocancel (open64_nocancel.c:39) ==99356== by 0xF15CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==99356== by 0xD531822: ??? ==99356== by 0xD53196F: ??? ==99356== by 0x131156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99356== by 0x13115938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99356== by 0x130CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==99356== by 0x130702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==99356== by 0xE9F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99356== by 0xE990D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==99356== by 0xD687D38: PetscInitialize (pinit.c:924) ==99356== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==99356== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==99356== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==99356== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==99356== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==99356== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==99356== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==99356== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==99356== ==99356== Open file descriptor 114: ==99356== ==99356== ==99356== Open file descriptor 111: ==99356== ==99356== ==99356== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==99356== ==99356== ==99356== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==99356== ==99356== ==99356== ==99356== HEAP SUMMARY: ==99356== in use at exit: 700,700 bytes in 9,374 blocks ==99356== total heap usage: 9,143,316 allocs, 9,133,942 frees, 2,548,904,374 bytes allocated ==99356== ==99356== LEAK SUMMARY: ==99356== definitely lost: 0 bytes in 0 blocks ==99356== indirectly lost: 0 bytes in 0 blocks ==99356== possibly lost: 0 bytes in 0 blocks ==99356== still reachable: 56 bytes in 3 blocks ==99356== suppressed: 700,644 bytes in 9,371 blocks ==99356== Reachable blocks (those to which a pointer was found) are not shown. ==99356== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==99356== ==99356== For lists of detected and suppressed errors, rerun with: -s ==99356== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)