==117544== Memcheck, a memory error detector ==117544== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==117544== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==117544== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==117544== Parent PID: 97061 ==117544== ==117544== ==117544== FILE DESCRIPTORS: 9 open (3 std) at exit. ==117544== Open file descriptor 12: ==117544== at 0x1098C22D: pipe (pipe.c:29) ==117544== by 0x193EE07D: ??? ==117544== by 0x149504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==117544== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117544== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117544== by 0xEF06D38: PetscInitialize (pinit.c:924) ==117544== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==117544== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==117544== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==117544== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==117544== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==117544== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==117544== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==117544== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==117544== ==117544== Open file descriptor 8: /dev/shm/open_mpi.0000 ==117544== at 0x10990BCC: __open_nocancel (open64_nocancel.c:39) ==117544== by 0x10914C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==117544== by 0x10190822: ??? ==117544== by 0x1019096F: ??? ==117544== by 0x149F56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==117544== by 0x149F5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==117544== by 0x149AB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==117544== by 0x149502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==117544== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117544== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117544== by 0xEF06D38: PetscInitialize (pinit.c:924) ==117544== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==117544== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==117544== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==117544== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==117544== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==117544== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==117544== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==117544== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==117544== ==117544== Open file descriptor 114: ==117544== ==117544== ==117544== Open file descriptor 111: ==117544== ==117544== ==117544== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==117544== ==117544== ==117544== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==117544== ==117544== ==117544== ==117544== HEAP SUMMARY: ==117544== in use at exit: 700,786 bytes in 9,378 blocks ==117544== total heap usage: 1,753,195 allocs, 1,743,817 frees, 1,529,393,248 bytes allocated ==117544== ==117544== LEAK SUMMARY: ==117544== definitely lost: 0 bytes in 0 blocks ==117544== indirectly lost: 0 bytes in 0 blocks ==117544== possibly lost: 0 bytes in 0 blocks ==117544== still reachable: 56 bytes in 3 blocks ==117544== suppressed: 700,730 bytes in 9,375 blocks ==117544== Reachable blocks (those to which a pointer was found) are not shown. ==117544== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==117544== ==117544== For lists of detected and suppressed errors, rerun with: -s ==117544== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)