==117593== Memcheck, a memory error detector ==117593== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==117593== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==117593== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningVertexBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==117593== Parent PID: 97061 ==117593== ==117593== ==117593== FILE DESCRIPTORS: 9 open (3 std) at exit. ==117593== Open file descriptor 12: ==117593== at 0x1098C22D: pipe (pipe.c:29) ==117593== by 0x193EE07D: ??? ==117593== by 0x149504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==117593== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117593== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117593== by 0xEF06D38: PetscInitialize (pinit.c:924) ==117593== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==117593== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==117593== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==117593== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==117593== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==117593== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==117593== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==117593== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==117593== ==117593== Open file descriptor 8: /dev/shm/open_mpi.0000 ==117593== at 0x10990BCC: __open_nocancel (open64_nocancel.c:39) ==117593== by 0x10914C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==117593== by 0x10190822: ??? ==117593== by 0x1019096F: ??? ==117593== by 0x149F56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==117593== by 0x149F5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==117593== by 0x149AB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==117593== by 0x149502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==117593== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117593== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==117593== by 0xEF06D38: PetscInitialize (pinit.c:924) ==117593== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==117593== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==117593== by 0x12A553: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==117593== by 0x1246FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==117593== by 0x126B38: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==117593== by 0x126A34: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==117593== by 0x127047: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==117593== by 0x122F00: main (TestRunningVertexBasedCryptSimulationsTutorial.cpp:18) ==117593== ==117593== Open file descriptor 114: ==117593== ==117593== ==117593== Open file descriptor 111: ==117593== ==117593== ==117593== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedCryptSimulationsTutorial_valgrind.txt ==117593== ==117593== ==117593== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==117593== ==117593== ==117593== ==117593== HEAP SUMMARY: ==117593== in use at exit: 700,866 bytes in 9,379 blocks ==117593== total heap usage: 1,447,074 allocs, 1,437,695 frees, 1,464,692,285 bytes allocated ==117593== ==117593== LEAK SUMMARY: ==117593== definitely lost: 0 bytes in 0 blocks ==117593== indirectly lost: 0 bytes in 0 blocks ==117593== possibly lost: 0 bytes in 0 blocks ==117593== still reachable: 136 bytes in 4 blocks ==117593== suppressed: 700,730 bytes in 9,375 blocks ==117593== Reachable blocks (those to which a pointer was found) are not shown. ==117593== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==117593== ==117593== For lists of detected and suppressed errors, rerun with: -s ==117593== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)