==116981== Memcheck, a memory error detector ==116981== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==116981== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==116981== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==116981== Parent PID: 97061 ==116981== ==116981== ==116981== FILE DESCRIPTORS: 9 open (3 std) at exit. ==116981== Open file descriptor 12: ==116981== at 0x10C1A22D: pipe (pipe.c:29) ==116981== by 0x193EF07D: ??? ==116981== by 0x149A24CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==116981== by 0x10526418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116981== by 0x104BFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116981== by 0xF1B4D38: PetscInitialize (pinit.c:924) ==116981== by 0xF02658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==116981== by 0xF0265D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==116981== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==116981== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==116981== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==116981== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==116981== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==116981== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==116981== ==116981== Open file descriptor 8: /dev/shm/open_mpi.0000 ==116981== at 0x10C1EBCC: __open_nocancel (open64_nocancel.c:39) ==116981== by 0x10BA2C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==116981== by 0xF05E822: ??? ==116981== by 0xF05E96F: ??? ==116981== by 0x14A476DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116981== by 0x14A47938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116981== by 0x149FD922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116981== by 0x149A22DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==116981== by 0x10526418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116981== by 0x104BFD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116981== by 0xF1B4D38: PetscInitialize (pinit.c:924) ==116981== by 0xF02658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==116981== by 0xF0265D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==116981== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==116981== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==116981== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==116981== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==116981== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==116981== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==116981== ==116981== Open file descriptor 114: ==116981== ==116981== ==116981== Open file descriptor 111: ==116981== ==116981== ==116981== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==116981== ==116981== ==116981== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==116981== ==116981== ==116981== ==116981== HEAP SUMMARY: ==116981== in use at exit: 700,754 bytes in 9,377 blocks ==116981== total heap usage: 520,061 allocs, 510,684 frees, 1,561,952,968 bytes allocated ==116981== ==116981== LEAK SUMMARY: ==116981== definitely lost: 0 bytes in 0 blocks ==116981== indirectly lost: 0 bytes in 0 blocks ==116981== possibly lost: 0 bytes in 0 blocks ==116981== still reachable: 24 bytes in 2 blocks ==116981== suppressed: 700,730 bytes in 9,375 blocks ==116981== Reachable blocks (those to which a pointer was found) are not shown. ==116981== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==116981== ==116981== For lists of detected and suppressed errors, rerun with: -s ==116981== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)