==116943== Memcheck, a memory error detector ==116943== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==116943== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==116943== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVertexCryptBoundaryForce -malloc_debug -malloc_dump -memory_info ==116943== Parent PID: 97061 ==116943== ==116943== ==116943== FILE DESCRIPTORS: 9 open (3 std) at exit. ==116943== Open file descriptor 12: ==116943== at 0xF4D522D: pipe (pipe.c:29) ==116943== by 0x193EE07D: ??? ==116943== by 0x149EE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==116943== by 0x1129C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116943== by 0x11235D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116943== by 0xFF2CD38: PetscInitialize (pinit.c:924) ==116943== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==116943== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==116943== by 0x13263E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==116943== by 0x12A00F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==116943== by 0x12CBD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==116943== by 0x12CA70: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==116943== by 0x12D107: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==116943== by 0x128340: main (TestVertexCryptBoundaryForce.cpp:19) ==116943== ==116943== Open file descriptor 8: /dev/shm/open_mpi.0000 ==116943== at 0xF4D9BCC: __open_nocancel (open64_nocancel.c:39) ==116943== by 0xF45DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==116943== by 0xEE12822: ??? ==116943== by 0xEE1296F: ??? ==116943== by 0x14A956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116943== by 0x14A95938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116943== by 0x14A4B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==116943== by 0x149EE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==116943== by 0x1129C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116943== by 0x11235D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==116943== by 0xFF2CD38: PetscInitialize (pinit.c:924) ==116943== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==116943== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==116943== by 0x13263E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==116943== by 0x12A00F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==116943== by 0x12CBD0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==116943== by 0x12CA70: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==116943== by 0x12D107: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==116943== by 0x128340: main (TestVertexCryptBoundaryForce.cpp:19) ==116943== ==116943== Open file descriptor 114: ==116943== ==116943== ==116943== Open file descriptor 111: ==116943== ==116943== ==116943== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVertexCryptBoundaryForce_valgrind.txt ==116943== ==116943== ==116943== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==116943== ==116943== ==116943== ==116943== HEAP SUMMARY: ==116943== in use at exit: 700,786 bytes in 9,378 blocks ==116943== total heap usage: 57,026 allocs, 47,648 frees, 1,354,070,051 bytes allocated ==116943== ==116943== LEAK SUMMARY: ==116943== definitely lost: 0 bytes in 0 blocks ==116943== indirectly lost: 0 bytes in 0 blocks ==116943== possibly lost: 0 bytes in 0 blocks ==116943== still reachable: 56 bytes in 3 blocks ==116943== suppressed: 700,730 bytes in 9,375 blocks ==116943== Reachable blocks (those to which a pointer was found) are not shown. ==116943== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==116943== ==116943== For lists of detected and suppressed errors, rerun with: -s ==116943== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)