==214018== Memcheck, a memory error detector ==214018== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==214018== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==214018== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial -malloc_debug -malloc_dump -memory_info ==214018== Parent PID: 207728 ==214018== ==214018== ==214018== FILE DESCRIPTORS: 9 open (3 std) at exit. ==214018== Open file descriptor 12: ==214018== at 0xFEFE22D: pipe (pipe.c:29) ==214018== by 0x1891D07D: ??? ==214018== by 0x13E8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==214018== by 0xF808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==214018== by 0xF7A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==214018== by 0xE498D38: PetscInitialize (pinit.c:924) ==214018== by 0xE30A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==214018== by 0xE30A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==214018== by 0x13BDBF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==214018== by 0x135AB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==214018== by 0x1381A0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==214018== by 0x13809C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==214018== by 0x1386AF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==214018== by 0x134270: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==214018== ==214018== Open file descriptor 8: /dev/shm/open_mpi.0000 ==214018== at 0xFF02BCC: __open_nocancel (open64_nocancel.c:39) ==214018== by 0xFE86C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==214018== by 0xE342822: ??? ==214018== by 0xE34296F: ??? ==214018== by 0x13F316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==214018== by 0x13F31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==214018== by 0x13EE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==214018== by 0x13E8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==214018== by 0xF808418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==214018== by 0xF7A1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==214018== by 0xE498D38: PetscInitialize (pinit.c:924) ==214018== by 0xE30A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==214018== by 0xE30A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==214018== by 0x13BDBF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==214018== by 0x135AB1: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==214018== by 0x1381A0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==214018== by 0x13809C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==214018== by 0x1386AF: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==214018== by 0x134270: main (TestCreatingAndUsingANewCellBasedSimulationModifierTutorial.cpp:18) ==214018== ==214018== Open file descriptor 114: ==214018== ==214018== ==214018== Open file descriptor 111: ==214018== ==214018== ==214018== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewCellBasedSimulationModifierTutorial_valgrind.txt ==214018== ==214018== ==214018== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==214018== ==214018== ==214018== ==214018== HEAP SUMMARY: ==214018== in use at exit: 700,770 bytes in 9,378 blocks ==214018== total heap usage: 513,123 allocs, 503,745 frees, 1,665,525,244 bytes allocated ==214018== ==214018== LEAK SUMMARY: ==214018== definitely lost: 0 bytes in 0 blocks ==214018== indirectly lost: 0 bytes in 0 blocks ==214018== possibly lost: 0 bytes in 0 blocks ==214018== still reachable: 56 bytes in 3 blocks ==214018== suppressed: 700,714 bytes in 9,375 blocks ==214018== Reachable blocks (those to which a pointer was found) are not shown. ==214018== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==214018== ==214018== For lists of detected and suppressed errors, rerun with: -s ==214018== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)