==209428== Memcheck, a memory error detector ==209428== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==209428== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==209428== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==209428== Parent PID: 207728 ==209428== ==209428== ==209428== FILE DESCRIPTORS: 9 open (3 std) at exit. ==209428== Open file descriptor 12: ==209428== at 0xFFA322D: pipe (pipe.c:29) ==209428== by 0x1891D07D: ??? ==209428== by 0x13E8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==209428== by 0xF7C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209428== by 0xF75FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209428== by 0xE436D38: PetscInitialize (pinit.c:924) ==209428== by 0xE30A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==209428== by 0xE30A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==209428== by 0x16965F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==209428== by 0x16034F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==209428== by 0x1638A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==209428== by 0x163744: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==209428== by 0x163DDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==209428== by 0x15E680: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==209428== ==209428== Open file descriptor 8: /dev/shm/open_mpi.0000 ==209428== at 0xFFA7BCC: __open_nocancel (open64_nocancel.c:39) ==209428== by 0xFF2BC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==209428== by 0xF6C0822: ??? ==209428== by 0xF6C096F: ??? ==209428== by 0x13F316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==209428== by 0x13F31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==209428== by 0x13EE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==209428== by 0x13E8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==209428== by 0xF7C6418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209428== by 0xF75FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209428== by 0xE436D38: PetscInitialize (pinit.c:924) ==209428== by 0xE30A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==209428== by 0xE30A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==209428== by 0x16965F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==209428== by 0x16034F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==209428== by 0x1638A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==209428== by 0x163744: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==209428== by 0x163DDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==209428== by 0x15E680: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==209428== ==209428== Open file descriptor 114: ==209428== ==209428== ==209428== Open file descriptor 111: ==209428== ==209428== ==209428== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==209428== ==209428== ==209428== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==209428== ==209428== ==209428== ==209428== HEAP SUMMARY: ==209428== in use at exit: 700,770 bytes in 9,378 blocks ==209428== total heap usage: 221,957 allocs, 212,579 frees, 1,378,539,206 bytes allocated ==209428== ==209428== LEAK SUMMARY: ==209428== definitely lost: 0 bytes in 0 blocks ==209428== indirectly lost: 0 bytes in 0 blocks ==209428== possibly lost: 0 bytes in 0 blocks ==209428== still reachable: 56 bytes in 3 blocks ==209428== suppressed: 700,714 bytes in 9,375 blocks ==209428== Reachable blocks (those to which a pointer was found) are not shown. ==209428== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==209428== ==209428== For lists of detected and suppressed errors, rerun with: -s ==209428== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)