==228272== Memcheck, a memory error detector ==228272== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==228272== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==228272== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==228272== Parent PID: 207728 ==228272== ==228272== ==228272== FILE DESCRIPTORS: 9 open (3 std) at exit. ==228272== Open file descriptor 12: ==228272== at 0x1179D22D: pipe (pipe.c:29) ==228272== by 0x1A1FF07D: ??? ==228272== by 0x157614CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==228272== by 0x110A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228272== by 0x11040D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228272== by 0xFD17D38: PetscInitialize (pinit.c:924) ==228272== by 0xFBEB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==228272== by 0xFBEB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==228272== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==228272== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==228272== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==228272== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==228272== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==228272== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==228272== ==228272== Open file descriptor 8: /dev/shm/open_mpi.0000 ==228272== at 0x117A1BCC: __open_nocancel (open64_nocancel.c:39) ==228272== by 0x11725C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==228272== by 0x10FA1822: ??? ==228272== by 0x10FA196F: ??? ==228272== by 0x158066DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==228272== by 0x15806938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==228272== by 0x157BC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==228272== by 0x157612DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==228272== by 0x110A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228272== by 0x11040D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228272== by 0xFD17D38: PetscInitialize (pinit.c:924) ==228272== by 0xFBEB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==228272== by 0xFBEB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==228272== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==228272== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==228272== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==228272== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==228272== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==228272== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==228272== ==228272== Open file descriptor 114: ==228272== ==228272== ==228272== Open file descriptor 111: ==228272== ==228272== ==228272== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==228272== ==228272== ==228272== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==228272== ==228272== ==228272== ==228272== HEAP SUMMARY: ==228272== in use at exit: 700,718 bytes in 9,374 blocks ==228272== total heap usage: 16,185,945 allocs, 16,176,571 frees, 2,886,033,162 bytes allocated ==228272== ==228272== LEAK SUMMARY: ==228272== definitely lost: 0 bytes in 0 blocks ==228272== indirectly lost: 0 bytes in 0 blocks ==228272== possibly lost: 0 bytes in 0 blocks ==228272== still reachable: 56 bytes in 3 blocks ==228272== suppressed: 700,662 bytes in 9,371 blocks ==228272== Reachable blocks (those to which a pointer was found) are not shown. ==228272== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==228272== ==228272== For lists of detected and suppressed errors, rerun with: -s ==228272== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)