==228378== Memcheck, a memory error detector ==228378== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==228378== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==228378== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==228378== Parent PID: 207728 ==228378== ==228378== ==228378== FILE DESCRIPTORS: 9 open (3 std) at exit. ==228378== Open file descriptor 12: ==228378== at 0x1179D22D: pipe (pipe.c:29) ==228378== by 0x1A1FF07D: ??? ==228378== by 0x157614CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==228378== by 0x110A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228378== by 0x11040D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228378== by 0xFD17D38: PetscInitialize (pinit.c:924) ==228378== by 0xFBEB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==228378== by 0xFBEB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==228378== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==228378== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==228378== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==228378== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==228378== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==228378== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==228378== ==228378== Open file descriptor 8: /dev/shm/open_mpi.0000 ==228378== at 0x117A1BCC: __open_nocancel (open64_nocancel.c:39) ==228378== by 0x11725C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==228378== by 0x10FA1822: ??? ==228378== by 0x10FA196F: ??? ==228378== by 0x158066DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==228378== by 0x15806938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==228378== by 0x157BC922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==228378== by 0x157612DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==228378== by 0x110A7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228378== by 0x11040D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==228378== by 0xFD17D38: PetscInitialize (pinit.c:924) ==228378== by 0xFBEB58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==228378== by 0xFBEB5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==228378== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==228378== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==228378== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==228378== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==228378== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==228378== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==228378== ==228378== Open file descriptor 114: ==228378== ==228378== ==228378== Open file descriptor 111: ==228378== ==228378== ==228378== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==228378== ==228378== ==228378== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==228378== ==228378== ==228378== ==228378== HEAP SUMMARY: ==228378== in use at exit: 700,786 bytes in 9,378 blocks ==228378== total heap usage: 1,754,001 allocs, 1,744,623 frees, 1,533,354,450 bytes allocated ==228378== ==228378== LEAK SUMMARY: ==228378== definitely lost: 0 bytes in 0 blocks ==228378== indirectly lost: 0 bytes in 0 blocks ==228378== possibly lost: 0 bytes in 0 blocks ==228378== still reachable: 56 bytes in 3 blocks ==228378== suppressed: 700,730 bytes in 9,375 blocks ==228378== Reachable blocks (those to which a pointer was found) are not shown. ==228378== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==228378== ==228378== For lists of detected and suppressed errors, rerun with: -s ==228378== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)