==226601== Memcheck, a memory error detector ==226601== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==226601== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==226601== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==226601== Parent PID: 207728 ==226601== ==226601== ==226601== FILE DESCRIPTORS: 9 open (3 std) at exit. ==226601== Open file descriptor 12: ==226601== at 0xEDB522D: pipe (pipe.c:29) ==226601== by 0x1891C07D: ??? ==226601== by 0x13F204CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==226601== by 0x106E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==226601== by 0x1067ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==226601== by 0xF373D38: PetscInitialize (pinit.c:924) ==226601== by 0xE6BA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==226601== by 0xE6BA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==226601== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==226601== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==226601== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==226601== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==226601== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==226601== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==226601== ==226601== Open file descriptor 8: /dev/shm/open_mpi.0000 ==226601== at 0xEDB9BCC: __open_nocancel (open64_nocancel.c:39) ==226601== by 0xED3DC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==226601== by 0xE6F2822: ??? ==226601== by 0xE6F296F: ??? ==226601== by 0x13FC56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==226601== by 0x13FC5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==226601== by 0x13F7B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==226601== by 0x13F202DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==226601== by 0x106E5418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==226601== by 0x1067ED7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==226601== by 0xF373D38: PetscInitialize (pinit.c:924) ==226601== by 0xE6BA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==226601== by 0xE6BA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==226601== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==226601== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==226601== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==226601== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==226601== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==226601== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==226601== ==226601== Open file descriptor 114: ==226601== ==226601== ==226601== Open file descriptor 111: ==226601== ==226601== ==226601== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==226601== ==226601== ==226601== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==226601== ==226601== ==226601== ==226601== HEAP SUMMARY: ==226601== in use at exit: 700,770 bytes in 9,378 blocks ==226601== total heap usage: 2,084,541 allocs, 2,075,163 frees, 1,689,616,964 bytes allocated ==226601== ==226601== LEAK SUMMARY: ==226601== definitely lost: 0 bytes in 0 blocks ==226601== indirectly lost: 0 bytes in 0 blocks ==226601== possibly lost: 0 bytes in 0 blocks ==226601== still reachable: 56 bytes in 3 blocks ==226601== suppressed: 700,714 bytes in 9,375 blocks ==226601== Reachable blocks (those to which a pointer was found) are not shown. ==226601== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==226601== ==226601== For lists of detected and suppressed errors, rerun with: -s ==226601== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 36 from 36)