==209301== Memcheck, a memory error detector ==209301== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==209301== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==209301== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestTysonNovak2001OdeSystem -malloc_debug -malloc_dump -memory_info ==209301== Parent PID: 207728 ==209301== ==209301== ==209301== FILE DESCRIPTORS: 9 open (3 std) at exit. ==209301== Open file descriptor 12: ==209301== at 0xD06922D: pipe (pipe.c:29) ==209301== by 0x1891C07D: ??? ==209301== by 0x13ED84CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==209301== by 0x1039E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209301== by 0x10337D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209301== by 0xF02ED38: PetscInitialize (pinit.c:924) ==209301== by 0xCC7158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==209301== by 0xCC715D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==209301== by 0x123FB6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==209301== by 0x11F5E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==209301== by 0x121B8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==209301== by 0x121A8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==209301== by 0x12209D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==209301== by 0x11DDE5: main (TestTysonNovak2001OdeSystem.cpp:18) ==209301== ==209301== Open file descriptor 8: /dev/shm/open_mpi.0000 ==209301== at 0xD06DBCC: __open_nocancel (open64_nocancel.c:39) ==209301== by 0xCFF1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==209301== by 0xCCA9822: ??? ==209301== by 0xCCA996F: ??? ==209301== by 0x13F7D6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==209301== by 0x13F7D938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==209301== by 0x13F33922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==209301== by 0x13ED82DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==209301== by 0x1039E418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209301== by 0x10337D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==209301== by 0xF02ED38: PetscInitialize (pinit.c:924) ==209301== by 0xCC7158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==209301== by 0xCC715D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==209301== by 0x123FB6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==209301== by 0x11F5E3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==209301== by 0x121B8E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==209301== by 0x121A8A: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==209301== by 0x12209D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==209301== by 0x11DDE5: main (TestTysonNovak2001OdeSystem.cpp:18) ==209301== ==209301== Open file descriptor 114: ==209301== ==209301== ==209301== Open file descriptor 111: ==209301== ==209301== ==209301== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestTysonNovak2001OdeSystem_valgrind.txt ==209301== ==209301== ==209301== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==209301== ==209301== ==209301== ==209301== HEAP SUMMARY: ==209301== in use at exit: 700,738 bytes in 9,377 blocks ==209301== total heap usage: 59,950 allocs, 50,573 frees, 1,354,253,182 bytes allocated ==209301== ==209301== LEAK SUMMARY: ==209301== definitely lost: 0 bytes in 0 blocks ==209301== indirectly lost: 0 bytes in 0 blocks ==209301== possibly lost: 0 bytes in 0 blocks ==209301== still reachable: 24 bytes in 2 blocks ==209301== suppressed: 700,714 bytes in 9,375 blocks ==209301== Reachable blocks (those to which a pointer was found) are not shown. ==209301== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==209301== ==209301== For lists of detected and suppressed errors, rerun with: -s ==209301== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)