==255349== Memcheck, a memory error detector ==255349== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==255349== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==255349== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestMeshBasedCellPopulationWithGhostNodes -malloc_debug -malloc_dump -memory_info ==255349== Parent PID: 253633 ==255349== ==255349== ==255349== FILE DESCRIPTORS: 9 open (3 std) at exit. ==255349== Open file descriptor 12: ==255349== at 0xFFA422D: pipe (pipe.c:29) ==255349== by 0x1891D07D: ??? ==255349== by 0x13E8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==255349== by 0xF7C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255349== by 0xF760D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255349== by 0xE437D38: PetscInitialize (pinit.c:924) ==255349== by 0xE30B58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==255349== by 0xE30B5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==255349== by 0x16965F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==255349== by 0x16034F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==255349== by 0x1638A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==255349== by 0x163744: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==255349== by 0x163DDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==255349== by 0x15E680: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==255349== ==255349== Open file descriptor 8: /dev/shm/open_mpi.0000 ==255349== at 0xFFA8BCC: __open_nocancel (open64_nocancel.c:39) ==255349== by 0xFF2CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==255349== by 0xF6C1822: ??? ==255349== by 0xF6C196F: ??? ==255349== by 0x13F316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255349== by 0x13F31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255349== by 0x13EE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255349== by 0x13E8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==255349== by 0xF7C7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255349== by 0xF760D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255349== by 0xE437D38: PetscInitialize (pinit.c:924) ==255349== by 0xE30B58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==255349== by 0xE30B5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==255349== by 0x16965F: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==255349== by 0x16034F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==255349== by 0x1638A4: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==255349== by 0x163744: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==255349== by 0x163DDB: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==255349== by 0x15E680: main (TestMeshBasedCellPopulationWithGhostNodes.cpp:19) ==255349== ==255349== Open file descriptor 114: ==255349== ==255349== ==255349== Open file descriptor 111: ==255349== ==255349== ==255349== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestMeshBasedCellPopulationWithGhostNodes_valgrind.txt ==255349== ==255349== ==255349== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==255349== ==255349== ==255349== ==255349== HEAP SUMMARY: ==255349== in use at exit: 700,770 bytes in 9,378 blocks ==255349== total heap usage: 221,965 allocs, 212,587 frees, 1,378,556,884 bytes allocated ==255349== ==255349== LEAK SUMMARY: ==255349== definitely lost: 0 bytes in 0 blocks ==255349== indirectly lost: 0 bytes in 0 blocks ==255349== possibly lost: 0 bytes in 0 blocks ==255349== still reachable: 56 bytes in 3 blocks ==255349== suppressed: 700,714 bytes in 9,375 blocks ==255349== Reachable blocks (those to which a pointer was found) are not shown. ==255349== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==255349== ==255349== For lists of detected and suppressed errors, rerun with: -s ==255349== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)