==255838== Memcheck, a memory error detector ==255838== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==255838== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==255838== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==255838== Parent PID: 253633 ==255838== ==255838== ==255838== FILE DESCRIPTORS: 9 open (3 std) at exit. ==255838== Open file descriptor 12: ==255838== at 0xEAED22D: pipe (pipe.c:29) ==255838== by 0x1891D07D: ??? ==255838== by 0x13F2A4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==255838== by 0x107CD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255838== by 0x10766D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255838== by 0xF45DD38: PetscInitialize (pinit.c:924) ==255838== by 0xE30B58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==255838== by 0xE30B5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==255838== by 0x13F008: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==255838== by 0x1388FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==255838== by 0x13B254: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==255838== by 0x13B150: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==255838== by 0x13B763: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==255838== by 0x137100: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==255838== ==255838== Open file descriptor 8: /dev/shm/open_mpi.0000 ==255838== at 0xEAF1BCC: __open_nocancel (open64_nocancel.c:39) ==255838== by 0xEA75C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==255838== by 0xE343822: ??? ==255838== by 0xE34396F: ??? ==255838== by 0x13FCF6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255838== by 0x13FCF938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255838== by 0x13F85922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==255838== by 0x13F2A2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==255838== by 0x107CD418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255838== by 0x10766D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==255838== by 0xF45DD38: PetscInitialize (pinit.c:924) ==255838== by 0xE30B58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==255838== by 0xE30B5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==255838== by 0x13F008: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==255838== by 0x1388FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==255838== by 0x13B254: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==255838== by 0x13B150: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==255838== by 0x13B763: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==255838== by 0x137100: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==255838== ==255838== Open file descriptor 114: ==255838== ==255838== ==255838== Open file descriptor 111: ==255838== ==255838== ==255838== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==255838== ==255838== ==255838== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==255838== ==255838== ==255838== ==255838== HEAP SUMMARY: ==255838== in use at exit: 700,702 bytes in 9,374 blocks ==255838== total heap usage: 6,671,471 allocs, 6,662,097 frees, 9,009,602,024 bytes allocated ==255838== ==255838== LEAK SUMMARY: ==255838== definitely lost: 0 bytes in 0 blocks ==255838== indirectly lost: 0 bytes in 0 blocks ==255838== possibly lost: 0 bytes in 0 blocks ==255838== still reachable: 56 bytes in 3 blocks ==255838== suppressed: 700,646 bytes in 9,371 blocks ==255838== Reachable blocks (those to which a pointer was found) are not shown. ==255838== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==255838== ==255838== For lists of detected and suppressed errors, rerun with: -s ==255838== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)