==337948== Memcheck, a memory error detector ==337948== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==337948== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==337948== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==337948== Parent PID: 330825 ==337948== ==337948== ==337948== FILE DESCRIPTORS: 9 open (3 std) at exit. ==337948== Open file descriptor 12: ==337948== at 0xE08D22D: pipe (pipe.c:29) ==337948== by 0x17B0B07D: ??? ==337948== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==337948== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337948== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337948== by 0xE64BD38: PetscInitialize (pinit.c:924) ==337948== by 0xD8A958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==337948== by 0xD8A95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==337948== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==337948== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==337948== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==337948== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==337948== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==337948== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==337948== ==337948== Open file descriptor 8: /dev/shm/open_mpi.0000 ==337948== at 0xE091BCC: __open_nocancel (open64_nocancel.c:39) ==337948== by 0xE015C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==337948== by 0xD8E1822: ??? ==337948== by 0xD8E196F: ??? ==337948== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==337948== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==337948== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==337948== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==337948== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337948== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337948== by 0xE64BD38: PetscInitialize (pinit.c:924) ==337948== by 0xD8A958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==337948== by 0xD8A95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==337948== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==337948== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==337948== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==337948== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==337948== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==337948== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==337948== ==337948== Open file descriptor 114: ==337948== ==337948== ==337948== Open file descriptor 111: ==337948== ==337948== ==337948== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==337948== ==337948== ==337948== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==337948== ==337948== ==337948== ==337948== HEAP SUMMARY: ==337948== in use at exit: 700,702 bytes in 9,374 blocks ==337948== total heap usage: 2,336,101 allocs, 2,326,727 frees, 1,789,076,047 bytes allocated ==337948== ==337948== LEAK SUMMARY: ==337948== definitely lost: 0 bytes in 0 blocks ==337948== indirectly lost: 0 bytes in 0 blocks ==337948== possibly lost: 0 bytes in 0 blocks ==337948== still reachable: 56 bytes in 3 blocks ==337948== suppressed: 700,646 bytes in 9,371 blocks ==337948== Reachable blocks (those to which a pointer was found) are not shown. ==337948== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==337948== ==337948== For lists of detected and suppressed errors, rerun with: -s ==337948== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)