==337984== Memcheck, a memory error detector ==337984== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==337984== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==337984== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==337984== Parent PID: 330825 ==337984== ==337984== ==337984== FILE DESCRIPTORS: 9 open (3 std) at exit. ==337984== Open file descriptor 12: ==337984== at 0xDD1F22D: pipe (pipe.c:29) ==337984== by 0x17B0D07D: ??? ==337984== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==337984== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337984== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337984== by 0xE64BD38: PetscInitialize (pinit.c:924) ==337984== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==337984== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==337984== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==337984== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==337984== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==337984== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==337984== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==337984== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==337984== ==337984== Open file descriptor 8: /dev/shm/open_mpi.0000 ==337984== at 0xDD23BCC: __open_nocancel (open64_nocancel.c:39) ==337984== by 0xDCA7C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==337984== by 0xD531822: ??? ==337984== by 0xD53196F: ??? ==337984== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==337984== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==337984== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==337984== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==337984== by 0xF9BB418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337984== by 0xF954D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==337984== by 0xE64BD38: PetscInitialize (pinit.c:924) ==337984== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==337984== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==337984== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==337984== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==337984== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==337984== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==337984== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==337984== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==337984== ==337984== Open file descriptor 114: ==337984== ==337984== ==337984== Open file descriptor 111: ==337984== ==337984== ==337984== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==337984== ==337984== ==337984== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==337984== ==337984== ==337984== ==337984== HEAP SUMMARY: ==337984== in use at exit: 700,718 bytes in 9,375 blocks ==337984== total heap usage: 11,367,788 allocs, 11,358,413 frees, 2,209,005,334 bytes allocated ==337984== ==337984== LEAK SUMMARY: ==337984== definitely lost: 0 bytes in 0 blocks ==337984== indirectly lost: 0 bytes in 0 blocks ==337984== possibly lost: 0 bytes in 0 blocks ==337984== still reachable: 72 bytes in 4 blocks ==337984== suppressed: 700,646 bytes in 9,371 blocks ==337984== Reachable blocks (those to which a pointer was found) are not shown. ==337984== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==337984== ==337984== For lists of detected and suppressed errors, rerun with: -s ==337984== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)