==351169== Memcheck, a memory error detector ==351169== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==351169== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==351169== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==351169== Parent PID: 330825 ==351169== ==351169== ==351169== FILE DESCRIPTORS: 9 open (3 std) at exit. ==351169== Open file descriptor 12: ==351169== at 0x1098C22D: pipe (pipe.c:29) ==351169== by 0x193ED07D: ??? ==351169== by 0x149504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==351169== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==351169== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==351169== by 0xEF06D38: PetscInitialize (pinit.c:924) ==351169== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==351169== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==351169== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==351169== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==351169== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==351169== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==351169== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==351169== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==351169== ==351169== Open file descriptor 8: /dev/shm/open_mpi.0000 ==351169== at 0x10990BCC: __open_nocancel (open64_nocancel.c:39) ==351169== by 0x10914C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==351169== by 0x10190822: ??? ==351169== by 0x1019096F: ??? ==351169== by 0x149F56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==351169== by 0x149F5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==351169== by 0x149AB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==351169== by 0x149502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==351169== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==351169== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==351169== by 0xEF06D38: PetscInitialize (pinit.c:924) ==351169== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==351169== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==351169== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==351169== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==351169== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==351169== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==351169== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==351169== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==351169== ==351169== Open file descriptor 114: ==351169== ==351169== ==351169== Open file descriptor 111: ==351169== ==351169== ==351169== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==351169== ==351169== ==351169== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==351169== ==351169== ==351169== ==351169== HEAP SUMMARY: ==351169== in use at exit: 700,718 bytes in 9,374 blocks ==351169== total heap usage: 16,185,178 allocs, 16,175,804 frees, 2,844,118,084 bytes allocated ==351169== ==351169== LEAK SUMMARY: ==351169== definitely lost: 0 bytes in 0 blocks ==351169== indirectly lost: 0 bytes in 0 blocks ==351169== possibly lost: 0 bytes in 0 blocks ==351169== still reachable: 56 bytes in 3 blocks ==351169== suppressed: 700,662 bytes in 9,371 blocks ==351169== Reachable blocks (those to which a pointer was found) are not shown. ==351169== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==351169== ==351169== For lists of detected and suppressed errors, rerun with: -s ==351169== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)