==410713== Memcheck, a memory error detector ==410713== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==410713== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==410713== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==410713== Parent PID: 390691 ==410713== ==410713== ==410713== FILE DESCRIPTORS: 9 open (3 std) at exit. ==410713== Open file descriptor 12: ==410713== at 0xF60022D: pipe (pipe.c:29) ==410713== by 0x193ED07D: ??? ==410713== by 0x149EE4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==410713== by 0x1129C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==410713== by 0x11235D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==410713== by 0xFF2CD38: PetscInitialize (pinit.c:924) ==410713== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==410713== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==410713== by 0x24AE22: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==410713== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==410713== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==410713== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==410713== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==410713== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==410713== ==410713== Open file descriptor 8: /dev/shm/open_mpi.0000 ==410713== at 0xF604BCC: __open_nocancel (open64_nocancel.c:39) ==410713== by 0xF588C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==410713== by 0xEE12822: ??? ==410713== by 0xEE1296F: ??? ==410713== by 0x14A956DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==410713== by 0x14A95938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==410713== by 0x14A4B922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==410713== by 0x149EE2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==410713== by 0x1129C418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==410713== by 0x11235D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==410713== by 0xFF2CD38: PetscInitialize (pinit.c:924) ==410713== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==410713== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==410713== by 0x24AE22: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==410713== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==410713== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==410713== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==410713== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==410713== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==410713== ==410713== Open file descriptor 114: ==410713== ==410713== ==410713== Open file descriptor 111: ==410713== ==410713== ==410713== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==410713== ==410713== ==410713== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==410713== ==410713== ==410713== ==410713== HEAP SUMMARY: ==410713== in use at exit: 700,718 bytes in 9,374 blocks ==410713== total heap usage: 6,235,241 allocs, 6,225,867 frees, 2,065,244,570 bytes allocated ==410713== ==410713== LEAK SUMMARY: ==410713== definitely lost: 0 bytes in 0 blocks ==410713== indirectly lost: 0 bytes in 0 blocks ==410713== possibly lost: 0 bytes in 0 blocks ==410713== still reachable: 56 bytes in 3 blocks ==410713== suppressed: 700,662 bytes in 9,371 blocks ==410713== Reachable blocks (those to which a pointer was found) are not shown. ==410713== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==410713== ==410713== For lists of detected and suppressed errors, rerun with: -s ==410713== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)