==392382== Memcheck, a memory error detector ==392382== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==392382== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==392382== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNodeBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==392382== Parent PID: 390691 ==392382== ==392382== ==392382== FILE DESCRIPTORS: 9 open (3 std) at exit. ==392382== Open file descriptor 12: ==392382== at 0xDCD722D: pipe (pipe.c:29) ==392382== by 0x17B0D07D: ??? ==392382== by 0x1310E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==392382== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==392382== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==392382== by 0xE562D38: PetscInitialize (pinit.c:924) ==392382== by 0xD59858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==392382== by 0xD5985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==392382== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==392382== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==392382== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==392382== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==392382== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==392382== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==392382== ==392382== Open file descriptor 8: /dev/shm/open_mpi.0000 ==392382== at 0xDCDBBCC: __open_nocancel (open64_nocancel.c:39) ==392382== by 0xDC5FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==392382== by 0xD5D0822: ??? ==392382== by 0xD5D096F: ??? ==392382== by 0x131B36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==392382== by 0x131B3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==392382== by 0x13169922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==392382== by 0x1310E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==392382== by 0xF8D4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==392382== by 0xF86DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==392382== by 0xE562D38: PetscInitialize (pinit.c:924) ==392382== by 0xD59858B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==392382== by 0xD5985D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==392382== by 0x2F3E54: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==392382== by 0x2E9173: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==392382== by 0x2EDA8C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==392382== by 0x2ED92C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==392382== by 0x2EDFC3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==392382== by 0x2E7460: main (TestNodeBasedCellPopulation.cpp:19) ==392382== ==392382== Open file descriptor 114: ==392382== ==392382== ==392382== Open file descriptor 111: ==392382== ==392382== ==392382== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNodeBasedCellPopulation_valgrind.txt ==392382== ==392382== ==392382== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==392382== ==392382== ==392382== ==392382== HEAP SUMMARY: ==392382== in use at exit: 700,702 bytes in 9,374 blocks ==392382== total heap usage: 20,192,132 allocs, 20,182,758 frees, 2,577,754,202 bytes allocated ==392382== ==392382== LEAK SUMMARY: ==392382== definitely lost: 0 bytes in 0 blocks ==392382== indirectly lost: 0 bytes in 0 blocks ==392382== possibly lost: 0 bytes in 0 blocks ==392382== still reachable: 56 bytes in 3 blocks ==392382== suppressed: 700,646 bytes in 9,371 blocks ==392382== Reachable blocks (those to which a pointer was found) are not shown. ==392382== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==392382== ==392382== For lists of detected and suppressed errors, rerun with: -s ==392382== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)