==393014== Memcheck, a memory error detector ==393014== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==393014== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==393014== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==393014== Parent PID: 390691 ==393014== ==393014== ==393014== FILE DESCRIPTORS: 9 open (3 std) at exit. ==393014== Open file descriptor 12: ==393014== at 0xF1D422D: pipe (pipe.c:29) ==393014== by 0x17B0B07D: ??? ==393014== by 0x130704CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==393014== by 0xE9F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==393014== by 0xE990D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==393014== by 0xD687D38: PetscInitialize (pinit.c:924) ==393014== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==393014== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==393014== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==393014== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==393014== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==393014== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==393014== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==393014== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==393014== ==393014== Open file descriptor 8: /dev/shm/open_mpi.0000 ==393014== at 0xF1D8BCC: __open_nocancel (open64_nocancel.c:39) ==393014== by 0xF15CC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==393014== by 0xD531822: ??? ==393014== by 0xD53196F: ??? ==393014== by 0x131156DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==393014== by 0x13115938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==393014== by 0x130CB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==393014== by 0x130702DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==393014== by 0xE9F7418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==393014== by 0xE990D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==393014== by 0xD687D38: PetscInitialize (pinit.c:924) ==393014== by 0xD4F958B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==393014== by 0xD4F95D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==393014== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==393014== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==393014== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==393014== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==393014== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==393014== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==393014== ==393014== Open file descriptor 114: ==393014== ==393014== ==393014== Open file descriptor 111: ==393014== ==393014== ==393014== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==393014== ==393014== ==393014== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==393014== ==393014== ==393014== ==393014== HEAP SUMMARY: ==393014== in use at exit: 700,702 bytes in 9,374 blocks ==393014== total heap usage: 9,143,317 allocs, 9,133,943 frees, 2,548,904,841 bytes allocated ==393014== ==393014== LEAK SUMMARY: ==393014== definitely lost: 0 bytes in 0 blocks ==393014== indirectly lost: 0 bytes in 0 blocks ==393014== possibly lost: 0 bytes in 0 blocks ==393014== still reachable: 56 bytes in 3 blocks ==393014== suppressed: 700,646 bytes in 9,371 blocks ==393014== Reachable blocks (those to which a pointer was found) are not shown. ==393014== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==393014== ==393014== For lists of detected and suppressed errors, rerun with: -s ==393014== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)