==411032== Memcheck, a memory error detector ==411032== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==411032== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==411032== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningCryptSimulationsWithMutationsTutorial -malloc_debug -malloc_dump -memory_info ==411032== Parent PID: 390691 ==411032== ==411032== ==411032== FILE DESCRIPTORS: 9 open (3 std) at exit. ==411032== Open file descriptor 12: ==411032== at 0x1098C22D: pipe (pipe.c:29) ==411032== by 0x193ED07D: ??? ==411032== by 0x149504CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==411032== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==411032== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==411032== by 0xEF06D38: PetscInitialize (pinit.c:924) ==411032== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==411032== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==411032== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==411032== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==411032== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==411032== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==411032== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==411032== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==411032== ==411032== Open file descriptor 8: /dev/shm/open_mpi.0000 ==411032== at 0x10990BCC: __open_nocancel (open64_nocancel.c:39) ==411032== by 0x10914C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==411032== by 0x10190822: ??? ==411032== by 0x1019096F: ??? ==411032== by 0x149F56DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==411032== by 0x149F5938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==411032== by 0x149AB922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==411032== by 0x149502DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==411032== by 0x10296418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==411032== by 0x1022FD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==411032== by 0xEF06D38: PetscInitialize (pinit.c:924) ==411032== by 0xEDDA58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==411032== by 0xEDDA5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==411032== by 0x12E5E1: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==411032== by 0x1287FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==411032== by 0x12AC06: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==411032== by 0x12AB02: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==411032== by 0x12B115: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==411032== by 0x127000: main (TestRunningCryptSimulationsWithMutationsTutorial.cpp:18) ==411032== ==411032== Open file descriptor 114: ==411032== ==411032== ==411032== Open file descriptor 111: ==411032== ==411032== ==411032== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningCryptSimulationsWithMutationsTutorial_valgrind.txt ==411032== ==411032== ==411032== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==411032== ==411032== ==411032== ==411032== HEAP SUMMARY: ==411032== in use at exit: 700,718 bytes in 9,374 blocks ==411032== total heap usage: 16,185,178 allocs, 16,175,804 frees, 2,844,118,178 bytes allocated ==411032== ==411032== LEAK SUMMARY: ==411032== definitely lost: 0 bytes in 0 blocks ==411032== indirectly lost: 0 bytes in 0 blocks ==411032== possibly lost: 0 bytes in 0 blocks ==411032== still reachable: 56 bytes in 3 blocks ==411032== suppressed: 700,662 bytes in 9,371 blocks ==411032== Reachable blocks (those to which a pointer was found) are not shown. ==411032== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==411032== ==411032== For lists of detected and suppressed errors, rerun with: -s ==411032== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)