==455012== Memcheck, a memory error detector ==455012== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==455012== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==455012== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningNodeBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==455012== Parent PID: 437051 ==455012== ==455012== ==455012== FILE DESCRIPTORS: 9 open (3 std) at exit. ==455012== Open file descriptor 12: ==455012== at 0xEAA722D: pipe (pipe.c:29) ==455012== by 0x188D707D: ??? ==455012== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==455012== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==455012== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==455012== by 0xF417D38: PetscInitialize (pinit.c:924) ==455012== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==455012== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==455012== by 0x1369CA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==455012== by 0x131DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==455012== by 0x13461C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==455012== by 0x1344BD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==455012== by 0x134B53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==455012== by 0x130100: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==455012== ==455012== Open file descriptor 8: /dev/shm/open_mpi.0000 ==455012== at 0xEAABBCC: __open_nocancel (open64_nocancel.c:39) ==455012== by 0xEA2FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==455012== by 0xE2FD822: ??? ==455012== by 0xE2FD96F: ??? ==455012== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==455012== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==455012== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==455012== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==455012== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==455012== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==455012== by 0xF417D38: PetscInitialize (pinit.c:924) ==455012== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==455012== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==455012== by 0x1369CA: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==455012== by 0x131DCF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==455012== by 0x13461C: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==455012== by 0x1344BD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==455012== by 0x134B53: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==455012== by 0x130100: main (TestRunningNodeBasedSimulationsTutorial.cpp:19) ==455012== ==455012== Open file descriptor 114: ==455012== ==455012== ==455012== Open file descriptor 111: ==455012== ==455012== ==455012== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningNodeBasedSimulationsTutorial_valgrind.txt ==455012== ==455012== ==455012== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==455012== ==455012== ==455012== ==455012== HEAP SUMMARY: ==455012== in use at exit: 700,770 bytes in 9,378 blocks ==455012== total heap usage: 669,420 allocs, 660,042 frees, 1,738,476,109 bytes allocated ==455012== ==455012== LEAK SUMMARY: ==455012== definitely lost: 0 bytes in 0 blocks ==455012== indirectly lost: 0 bytes in 0 blocks ==455012== possibly lost: 0 bytes in 0 blocks ==455012== still reachable: 56 bytes in 3 blocks ==455012== suppressed: 700,714 bytes in 9,375 blocks ==455012== Reachable blocks (those to which a pointer was found) are not shown. ==455012== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==455012== ==455012== For lists of detected and suppressed errors, rerun with: -s ==455012== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)