==510805== Memcheck, a memory error detector ==510805== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==510805== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==510805== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithMeshBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==510805== Parent PID: 490496 ==510805== ==510805== ==510805== FILE DESCRIPTORS: 9 open (3 std) at exit. ==510805== Open file descriptor 12: ==510805== at 0x103CC22D: pipe (pipe.c:29) ==510805== by 0x1A1BA07D: ??? ==510805== by 0x157BD4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==510805== by 0x12068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==510805== by 0x12001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==510805== by 0x10CF8D38: PetscInitialize (pinit.c:924) ==510805== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==510805== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==510805== by 0x24AE20: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==510805== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==510805== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==510805== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==510805== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==510805== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==510805== ==510805== Open file descriptor 8: /dev/shm/open_mpi.0000 ==510805== at 0x103D0BCC: __open_nocancel (open64_nocancel.c:39) ==510805== by 0x10354C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==510805== by 0xFBDE822: ??? ==510805== by 0xFBDE96F: ??? ==510805== by 0x158626DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==510805== by 0x15862938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==510805== by 0x15818922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==510805== by 0x157BD2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==510805== by 0x12068418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==510805== by 0x12001D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==510805== by 0x10CF8D38: PetscInitialize (pinit.c:924) ==510805== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==510805== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==510805== by 0x24AE20: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==510805== by 0x23F9F3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==510805== by 0x2441E0: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==510805== by 0x244080: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==510805== by 0x244717: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==510805== by 0x23DCE0: main (TestCryptSimulation2dWithMeshBasedCellPopulation.cpp:19) ==510805== ==510805== Open file descriptor 114: ==510805== ==510805== ==510805== Open file descriptor 111: ==510805== ==510805== ==510805== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithMeshBasedCellPopulation_valgrind.txt ==510805== ==510805== ==510805== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==510805== ==510805== ==510805== ==510805== HEAP SUMMARY: ==510805== in use at exit: 700,718 bytes in 9,374 blocks ==510805== total heap usage: 6,299,102 allocs, 6,289,728 frees, 2,078,871,420 bytes allocated ==510805== ==510805== LEAK SUMMARY: ==510805== definitely lost: 0 bytes in 0 blocks ==510805== indirectly lost: 0 bytes in 0 blocks ==510805== possibly lost: 0 bytes in 0 blocks ==510805== still reachable: 56 bytes in 3 blocks ==510805== suppressed: 700,662 bytes in 9,371 blocks ==510805== Reachable blocks (those to which a pointer was found) are not shown. ==510805== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==510805== ==510805== For lists of detected and suppressed errors, rerun with: -s ==510805== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)