==492830== Memcheck, a memory error detector ==492830== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==492830== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==492830== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d -malloc_debug -malloc_dump -memory_info ==492830== Parent PID: 490496 ==492830== ==492830== ==492830== FILE DESCRIPTORS: 9 open (3 std) at exit. ==492830== Open file descriptor 12: ==492830== at 0xEAA722D: pipe (pipe.c:29) ==492830== by 0x188D707D: ??? ==492830== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492830== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492830== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492830== by 0xF417D38: PetscInitialize (pinit.c:924) ==492830== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492830== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492830== by 0x13F008: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492830== by 0x1388FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492830== by 0x13B254: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492830== by 0x13B150: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492830== by 0x13B763: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492830== by 0x137100: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==492830== ==492830== Open file descriptor 8: /dev/shm/open_mpi.0000 ==492830== at 0xEAABBCC: __open_nocancel (open64_nocancel.c:39) ==492830== by 0xEA2FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==492830== by 0xE2FD822: ??? ==492830== by 0xE2FD96F: ??? ==492830== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492830== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492830== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492830== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492830== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492830== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492830== by 0xF417D38: PetscInitialize (pinit.c:924) ==492830== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492830== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492830== by 0x13F008: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492830== by 0x1388FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492830== by 0x13B254: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492830== by 0x13B150: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492830== by 0x13B763: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492830== by 0x137100: main (TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d.cpp:18) ==492830== ==492830== Open file descriptor 114: ==492830== ==492830== ==492830== Open file descriptor 111: ==492830== ==492830== ==492830== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithNodeBasedCellPopulationIn3d_valgrind.txt ==492830== ==492830== ==492830== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==492830== ==492830== ==492830== ==492830== HEAP SUMMARY: ==492830== in use at exit: 700,702 bytes in 9,374 blocks ==492830== total heap usage: 6,671,634 allocs, 6,662,260 frees, 9,009,354,721 bytes allocated ==492830== ==492830== LEAK SUMMARY: ==492830== definitely lost: 0 bytes in 0 blocks ==492830== indirectly lost: 0 bytes in 0 blocks ==492830== possibly lost: 0 bytes in 0 blocks ==492830== still reachable: 56 bytes in 3 blocks ==492830== suppressed: 700,646 bytes in 9,371 blocks ==492830== Reachable blocks (those to which a pointer was found) are not shown. ==492830== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==492830== ==492830== For lists of detected and suppressed errors, rerun with: -s ==492830== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)