==492901== Memcheck, a memory error detector ==492901== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==492901== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==492901== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==492901== Parent PID: 490496 ==492901== ==492901== ==492901== FILE DESCRIPTORS: 9 open (3 std) at exit. ==492901== Open file descriptor 12: ==492901== at 0xEE9B22D: pipe (pipe.c:29) ==492901== by 0x188D707D: ??? ==492901== by 0x13EE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492901== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492901== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492901== by 0xF417D38: PetscInitialize (pinit.c:924) ==492901== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492901== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492901== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492901== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492901== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492901== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492901== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492901== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==492901== ==492901== Open file descriptor 8: /dev/shm/open_mpi.0000 ==492901== at 0xEE9FBCC: __open_nocancel (open64_nocancel.c:39) ==492901== by 0xEE23C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==492901== by 0xE6AD822: ??? ==492901== by 0xE6AD96F: ??? ==492901== by 0x13F886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492901== by 0x13F88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492901== by 0x13F3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==492901== by 0x13EE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==492901== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492901== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==492901== by 0xF417D38: PetscInitialize (pinit.c:924) ==492901== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==492901== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==492901== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==492901== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==492901== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==492901== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==492901== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==492901== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==492901== ==492901== Open file descriptor 114: ==492901== ==492901== ==492901== Open file descriptor 111: ==492901== ==492901== ==492901== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==492901== ==492901== ==492901== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==492901== ==492901== ==492901== ==492901== HEAP SUMMARY: ==492901== in use at exit: 700,702 bytes in 9,374 blocks ==492901== total heap usage: 7,461,462 allocs, 7,452,088 frees, 2,655,040,956 bytes allocated ==492901== ==492901== LEAK SUMMARY: ==492901== definitely lost: 0 bytes in 0 blocks ==492901== indirectly lost: 0 bytes in 0 blocks ==492901== possibly lost: 0 bytes in 0 blocks ==492901== still reachable: 56 bytes in 3 blocks ==492901== suppressed: 700,646 bytes in 9,371 blocks ==492901== Reachable blocks (those to which a pointer was found) are not shown. ==492901== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==492901== ==492901== For lists of detected and suppressed errors, rerun with: -s ==492901== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)