==493080== Memcheck, a memory error detector ==493080== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==493080== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==493080== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==493080== Parent PID: 490496 ==493080== ==493080== ==493080== FILE DESCRIPTORS: 9 open (3 std) at exit. ==493080== Open file descriptor 12: ==493080== at 0xFFA022D: pipe (pipe.c:29) ==493080== by 0x188D707D: ??? ==493080== by 0x13E3E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==493080== by 0xF7C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493080== by 0xF75CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493080== by 0xE453D38: PetscInitialize (pinit.c:924) ==493080== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==493080== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==493080== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==493080== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==493080== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==493080== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==493080== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==493080== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==493080== ==493080== Open file descriptor 8: /dev/shm/open_mpi.0000 ==493080== at 0xFFA4BCC: __open_nocancel (open64_nocancel.c:39) ==493080== by 0xFF28C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==493080== by 0xE2FD822: ??? ==493080== by 0xE2FD96F: ??? ==493080== by 0x13EE36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==493080== by 0x13EE3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==493080== by 0x13E99922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==493080== by 0x13E3E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==493080== by 0xF7C3418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493080== by 0xF75CD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493080== by 0xE453D38: PetscInitialize (pinit.c:924) ==493080== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==493080== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==493080== by 0x210737: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==493080== by 0x208C73: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==493080== by 0x20C728: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==493080== by 0x20C5C8: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==493080== by 0x20CC5F: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==493080== by 0x206F60: main (TestOffLatticeSimulationWithVertexBasedCellPopulation.cpp:19) ==493080== ==493080== Open file descriptor 114: ==493080== ==493080== ==493080== Open file descriptor 111: ==493080== ==493080== ==493080== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithVertexBasedCellPopulation_valgrind.txt ==493080== ==493080== ==493080== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==493080== ==493080== ==493080== ==493080== HEAP SUMMARY: ==493080== in use at exit: 700,702 bytes in 9,374 blocks ==493080== total heap usage: 9,623,413 allocs, 9,614,039 frees, 2,573,109,833 bytes allocated ==493080== ==493080== LEAK SUMMARY: ==493080== definitely lost: 0 bytes in 0 blocks ==493080== indirectly lost: 0 bytes in 0 blocks ==493080== possibly lost: 0 bytes in 0 blocks ==493080== still reachable: 56 bytes in 3 blocks ==493080== suppressed: 700,646 bytes in 9,371 blocks ==493080== Reachable blocks (those to which a pointer was found) are not shown. ==493080== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==493080== ==493080== For lists of detected and suppressed errors, rerun with: -s ==493080== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)