==493778== Memcheck, a memory error detector ==493778== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==493778== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==493778== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==493778== Parent PID: 490496 ==493778== ==493778== ==493778== FILE DESCRIPTORS: 9 open (3 std) at exit. ==493778== Open file descriptor 12: ==493778== at 0xEE5922D: pipe (pipe.c:29) ==493778== by 0x188D707D: ??? ==493778== by 0x13EE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==493778== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493778== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493778== by 0xF417D38: PetscInitialize (pinit.c:924) ==493778== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==493778== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==493778== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==493778== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==493778== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==493778== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==493778== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==493778== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==493778== ==493778== Open file descriptor 8: /dev/shm/open_mpi.0000 ==493778== at 0xEE5DBCC: __open_nocancel (open64_nocancel.c:39) ==493778== by 0xEDE1C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==493778== by 0xE6AD822: ??? ==493778== by 0xE6AD96F: ??? ==493778== by 0x13F886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==493778== by 0x13F88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==493778== by 0x13F3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==493778== by 0x13EE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==493778== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493778== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==493778== by 0xF417D38: PetscInitialize (pinit.c:924) ==493778== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==493778== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==493778== by 0x14102E: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==493778== by 0x13A587: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==493778== by 0x13D31E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==493778== by 0x13D1BE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==493778== by 0x13D855: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==493778== by 0x138880: main (TestOnLatticeSimulationWithPdes.cpp:19) ==493778== ==493778== Open file descriptor 114: ==493778== ==493778== ==493778== Open file descriptor 111: ==493778== ==493778== ==493778== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPdes_valgrind.txt ==493778== ==493778== ==493778== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==493778== ==493778== ==493778== ==493778== HEAP SUMMARY: ==493778== in use at exit: 700,770 bytes in 9,378 blocks ==493778== total heap usage: 2,341,350 allocs, 2,331,972 frees, 1,789,941,635 bytes allocated ==493778== ==493778== LEAK SUMMARY: ==493778== definitely lost: 0 bytes in 0 blocks ==493778== indirectly lost: 0 bytes in 0 blocks ==493778== possibly lost: 0 bytes in 0 blocks ==493778== still reachable: 56 bytes in 3 blocks ==493778== suppressed: 700,714 bytes in 9,375 blocks ==493778== Reachable blocks (those to which a pointer was found) are not shown. ==493778== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==493778== ==493778== For lists of detected and suppressed errors, rerun with: -s ==493778== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)