==509404== Memcheck, a memory error detector ==509404== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==509404== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==509404== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningPottsBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==509404== Parent PID: 490496 ==509404== ==509404== ==509404== FILE DESCRIPTORS: 9 open (3 std) at exit. ==509404== Open file descriptor 12: ==509404== at 0xD07722D: pipe (pipe.c:29) ==509404== by 0x188D907D: ??? ==509404== by 0x13EDA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==509404== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509404== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509404== by 0xF330D38: PetscInitialize (pinit.c:924) ==509404== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==509404== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==509404== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==509404== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==509404== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==509404== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==509404== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==509404== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==509404== ==509404== Open file descriptor 8: /dev/shm/open_mpi.0000 ==509404== at 0xD07BBCC: __open_nocancel (open64_nocancel.c:39) ==509404== by 0xCFFFC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==509404== by 0xC9B2822: ??? ==509404== by 0xC9B296F: ??? ==509404== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==509404== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==509404== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==509404== by 0x13EDA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==509404== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509404== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509404== by 0xF330D38: PetscInitialize (pinit.c:924) ==509404== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==509404== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==509404== by 0x12EAC6: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==509404== by 0x129E6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==509404== by 0x12C62E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==509404== by 0x12C4CF: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==509404== by 0x12CB65: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==509404== by 0x1281A0: main (TestRunningPottsBasedSimulationsTutorial.cpp:19) ==509404== ==509404== Open file descriptor 114: ==509404== ==509404== ==509404== Open file descriptor 111: ==509404== ==509404== ==509404== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningPottsBasedSimulationsTutorial_valgrind.txt ==509404== ==509404== ==509404== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==509404== ==509404== ==509404== ==509404== HEAP SUMMARY: ==509404== in use at exit: 700,702 bytes in 9,374 blocks ==509404== total heap usage: 40,686,662 allocs, 40,677,288 frees, 3,864,432,885 bytes allocated ==509404== ==509404== LEAK SUMMARY: ==509404== definitely lost: 0 bytes in 0 blocks ==509404== indirectly lost: 0 bytes in 0 blocks ==509404== possibly lost: 0 bytes in 0 blocks ==509404== still reachable: 56 bytes in 3 blocks ==509404== suppressed: 700,646 bytes in 9,371 blocks ==509404== Reachable blocks (those to which a pointer was found) are not shown. ==509404== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==509404== ==509404== For lists of detected and suppressed errors, rerun with: -s ==509404== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)