==509783== Memcheck, a memory error detector ==509783== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==509783== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==509783== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningTumourSpheroidSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==509783== Parent PID: 490496 ==509783== ==509783== ==509783== FILE DESCRIPTORS: 9 open (3 std) at exit. ==509783== Open file descriptor 12: ==509783== at 0xED7022D: pipe (pipe.c:29) ==509783== by 0x188D707D: ??? ==509783== by 0x13EE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==509783== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509783== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509783== by 0xF32ED38: PetscInitialize (pinit.c:924) ==509783== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==509783== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==509783== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==509783== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==509783== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==509783== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==509783== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==509783== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==509783== ==509783== Open file descriptor 8: /dev/shm/open_mpi.0000 ==509783== at 0xED74BCC: __open_nocancel (open64_nocancel.c:39) ==509783== by 0xECF8C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==509783== by 0xE6AD822: ??? ==509783== by 0xE6AD96F: ??? ==509783== by 0x13F886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==509783== by 0x13F88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==509783== by 0x13F3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==509783== by 0x13EE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==509783== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509783== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==509783== by 0xF32ED38: PetscInitialize (pinit.c:924) ==509783== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==509783== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==509783== by 0x1261C0: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==509783== by 0x12041D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==509783== by 0x1228A6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==509783== by 0x1227A2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==509783== by 0x122DB5: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==509783== by 0x11EC20: main (TestRunningTumourSpheroidSimulationsTutorial.cpp:18) ==509783== ==509783== Open file descriptor 114: ==509783== ==509783== ==509783== Open file descriptor 111: ==509783== ==509783== ==509783== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningTumourSpheroidSimulationsTutorial_valgrind.txt ==509783== ==509783== ==509783== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==509783== ==509783== ==509783== ==509783== HEAP SUMMARY: ==509783== in use at exit: 700,770 bytes in 9,378 blocks ==509783== total heap usage: 2,084,533 allocs, 2,075,155 frees, 1,689,616,265 bytes allocated ==509783== ==509783== LEAK SUMMARY: ==509783== definitely lost: 0 bytes in 0 blocks ==509783== indirectly lost: 0 bytes in 0 blocks ==509783== possibly lost: 0 bytes in 0 blocks ==509783== still reachable: 56 bytes in 3 blocks ==509783== suppressed: 700,714 bytes in 9,375 blocks ==509783== Reachable blocks (those to which a pointer was found) are not shown. ==509783== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==509783== ==509783== For lists of detected and suppressed errors, rerun with: -s ==509783== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)