==539522== Memcheck, a memory error detector ==539522== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==539522== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==539522== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCaUpdateRules -malloc_debug -malloc_dump -memory_info ==539522== Parent PID: 537925 ==539522== ==539522== ==539522== FILE DESCRIPTORS: 9 open (3 std) at exit. ==539522== Open file descriptor 12: ==539522== at 0xD0B922D: pipe (pipe.c:29) ==539522== by 0x188D907D: ??? ==539522== by 0x13EDA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==539522== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539522== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539522== by 0xF330D38: PetscInitialize (pinit.c:924) ==539522== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==539522== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==539522== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==539522== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==539522== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==539522== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==539522== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==539522== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==539522== ==539522== Open file descriptor 8: /dev/shm/open_mpi.0000 ==539522== at 0xD0BDBCC: __open_nocancel (open64_nocancel.c:39) ==539522== by 0xD041C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==539522== by 0xC9B2822: ??? ==539522== by 0xC9B296F: ??? ==539522== by 0x13F7F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==539522== by 0x13F7F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==539522== by 0x13F35922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==539522== by 0x13EDA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==539522== by 0x106A0418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539522== by 0x10639D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539522== by 0xF330D38: PetscInitialize (pinit.c:924) ==539522== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==539522== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==539522== by 0x13E258: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==539522== by 0x135EED: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==539522== by 0x138B56: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==539522== by 0x138A51: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==539522== by 0x139065: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==539522== by 0x1346F0: main (TestCaUpdateRules.cpp:18) ==539522== ==539522== Open file descriptor 114: ==539522== ==539522== ==539522== Open file descriptor 111: ==539522== ==539522== ==539522== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCaUpdateRules_valgrind.txt ==539522== ==539522== ==539522== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==539522== ==539522== ==539522== ==539522== HEAP SUMMARY: ==539522== in use at exit: 700,770 bytes in 9,378 blocks ==539522== total heap usage: 57,280 allocs, 47,902 frees, 1,354,143,552 bytes allocated ==539522== ==539522== LEAK SUMMARY: ==539522== definitely lost: 0 bytes in 0 blocks ==539522== indirectly lost: 0 bytes in 0 blocks ==539522== possibly lost: 0 bytes in 0 blocks ==539522== still reachable: 56 bytes in 3 blocks ==539522== suppressed: 700,714 bytes in 9,375 blocks ==539522== Reachable blocks (those to which a pointer was found) are not shown. ==539522== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==539522== ==539522== For lists of detected and suppressed errors, rerun with: -s ==539522== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)