==559631== Memcheck, a memory error detector ==559631== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==559631== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==559631== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/heart/test/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem -malloc_debug -malloc_dump -memory_info ==559631== Parent PID: 537925 ==559631== ==559631== ==559631== FILE DESCRIPTORS: 9 open (3 std) at exit. ==559631== Open file descriptor 12: ==559631== at 0x85AF22D: pipe (pipe.c:29) ==559631== by 0x140D307D: ??? ==559631== by 0xEBCA4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==559631== by 0x9CC2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559631== by 0x9C5BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559631== by 0x8952D38: PetscInitialize (pinit.c:924) ==559631== by 0x81DD58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==559631== by 0x81DD5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==559631== by 0x11518A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==559631== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==559631== by 0x112FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==559631== by 0x112ECD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==559631== by 0x1134E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==559631== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==559631== ==559631== Open file descriptor 8: /dev/shm/open_mpi.0000 ==559631== at 0x85B3BCC: __open_nocancel (open64_nocancel.c:39) ==559631== by 0x8537C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==559631== by 0x8215822: ??? ==559631== by 0x821596F: ??? ==559631== by 0xEC6F6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==559631== by 0xEC6F938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==559631== by 0xEC25922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==559631== by 0xEBCA2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==559631== by 0x9CC2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559631== by 0x9C5BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==559631== by 0x8952D38: PetscInitialize (pinit.c:924) ==559631== by 0x81DD58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==559631== by 0x81DD5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==559631== by 0x11518A: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==559631== by 0x110CB3: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==559631== by 0x112FD2: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==559631== by 0x112ECD: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==559631== by 0x1134E1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==559631== by 0x10F4B5: main (TestHodgkinHuxleySquidAxon1952OriginalOdeSystem.cpp:18) ==559631== ==559631== Open file descriptor 114: ==559631== ==559631== ==559631== Open file descriptor 111: ==559631== ==559631== ==559631== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestHodgkinHuxleySquidAxon1952OriginalOdeSystem_valgrind.txt ==559631== ==559631== ==559631== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==559631== ==559631== ==559631== ==559631== HEAP SUMMARY: ==559631== in use at exit: 700,754 bytes in 9,377 blocks ==559631== total heap usage: 51,065 allocs, 41,688 frees, 1,353,533,822 bytes allocated ==559631== ==559631== LEAK SUMMARY: ==559631== definitely lost: 0 bytes in 0 blocks ==559631== indirectly lost: 0 bytes in 0 blocks ==559631== possibly lost: 0 bytes in 0 blocks ==559631== still reachable: 24 bytes in 2 blocks ==559631== suppressed: 700,730 bytes in 9,375 blocks ==559631== Reachable blocks (those to which a pointer was found) are not shown. ==559631== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==559631== ==559631== For lists of detected and suppressed errors, rerun with: -s ==559631== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)