==539781== Memcheck, a memory error detector ==539781== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==539781== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==539781== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestNumericalMethods -malloc_debug -malloc_dump -memory_info ==539781== Parent PID: 537925 ==539781== ==539781== ==539781== FILE DESCRIPTORS: 9 open (3 std) at exit. ==539781== Open file descriptor 12: ==539781== at 0xEAA722D: pipe (pipe.c:29) ==539781== by 0x188D707D: ??? ==539781== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==539781== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539781== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539781== by 0xF417D38: PetscInitialize (pinit.c:924) ==539781== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==539781== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==539781== by 0x144DEE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==539781== by 0x13E1EF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==539781== by 0x1410AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==539781== by 0x140F4C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==539781== by 0x1415E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==539781== by 0x13C520: main (TestNumericalMethods.cpp:19) ==539781== ==539781== Open file descriptor 8: /dev/shm/open_mpi.0000 ==539781== at 0xEAABBCC: __open_nocancel (open64_nocancel.c:39) ==539781== by 0xEA2FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==539781== by 0xE2FD822: ??? ==539781== by 0xE2FD96F: ??? ==539781== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==539781== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==539781== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==539781== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==539781== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539781== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==539781== by 0xF417D38: PetscInitialize (pinit.c:924) ==539781== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==539781== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==539781== by 0x144DEE: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==539781== by 0x13E1EF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==539781== by 0x1410AC: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==539781== by 0x140F4C: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==539781== by 0x1415E3: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==539781== by 0x13C520: main (TestNumericalMethods.cpp:19) ==539781== ==539781== Open file descriptor 114: ==539781== ==539781== ==539781== Open file descriptor 111: ==539781== ==539781== ==539781== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestNumericalMethods_valgrind.txt ==539781== ==539781== ==539781== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==539781== ==539781== ==539781== ==539781== HEAP SUMMARY: ==539781== in use at exit: 700,770 bytes in 9,378 blocks ==539781== total heap usage: 70,267 allocs, 60,889 frees, 1,356,691,196 bytes allocated ==539781== ==539781== LEAK SUMMARY: ==539781== definitely lost: 0 bytes in 0 blocks ==539781== indirectly lost: 0 bytes in 0 blocks ==539781== possibly lost: 0 bytes in 0 blocks ==539781== still reachable: 56 bytes in 3 blocks ==539781== suppressed: 700,714 bytes in 9,375 blocks ==539781== Reachable blocks (those to which a pointer was found) are not shown. ==539781== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==539781== ==539781== For lists of detected and suppressed errors, rerun with: -s ==539781== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)