==540172== Memcheck, a memory error detector ==540172== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==540172== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==540172== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOffLatticeSimulationWithPdes -malloc_debug -malloc_dump -memory_info ==540172== Parent PID: 537925 ==540172== ==540172== ==540172== FILE DESCRIPTORS: 9 open (3 std) at exit. ==540172== Open file descriptor 12: ==540172== at 0xEE9B22D: pipe (pipe.c:29) ==540172== by 0x188D707D: ??? ==540172== by 0x13EE34CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==540172== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==540172== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==540172== by 0xF417D38: PetscInitialize (pinit.c:924) ==540172== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==540172== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==540172== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==540172== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==540172== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==540172== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==540172== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==540172== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==540172== ==540172== Open file descriptor 8: /dev/shm/open_mpi.0000 ==540172== at 0xEE9FBCC: __open_nocancel (open64_nocancel.c:39) ==540172== by 0xEE23C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==540172== by 0xE6AD822: ??? ==540172== by 0xE6AD96F: ??? ==540172== by 0x13F886DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==540172== by 0x13F88938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==540172== by 0x13F3E922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==540172== by 0x13EE32DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==540172== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==540172== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==540172== by 0xF417D38: PetscInitialize (pinit.c:924) ==540172== by 0xE67558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==540172== by 0xE6755D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==540172== by 0x234CAC: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==540172== by 0x22CD2B: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==540172== by 0x230952: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==540172== by 0x2307F2: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==540172== by 0x230E89: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==540172== by 0x22AFE0: main (TestOffLatticeSimulationWithPdes.cpp:19) ==540172== ==540172== Open file descriptor 114: ==540172== ==540172== ==540172== Open file descriptor 111: ==540172== ==540172== ==540172== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOffLatticeSimulationWithPdes_valgrind.txt ==540172== ==540172== ==540172== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==540172== ==540172== ==540172== ==540172== HEAP SUMMARY: ==540172== in use at exit: 700,702 bytes in 9,374 blocks ==540172== total heap usage: 7,459,693 allocs, 7,450,319 frees, 2,655,314,391 bytes allocated ==540172== ==540172== LEAK SUMMARY: ==540172== definitely lost: 0 bytes in 0 blocks ==540172== indirectly lost: 0 bytes in 0 blocks ==540172== possibly lost: 0 bytes in 0 blocks ==540172== still reachable: 56 bytes in 3 blocks ==540172== suppressed: 700,646 bytes in 9,371 blocks ==540172== Reachable blocks (those to which a pointer was found) are not shown. ==540172== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==540172== ==540172== For lists of detected and suppressed errors, rerun with: -s ==540172== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)