==544335== Memcheck, a memory error detector ==544335== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==544335== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==544335== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestOnLatticeSimulationWithPottsBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==544335== Parent PID: 537925 ==544335== ==544335== ==544335== FILE DESCRIPTORS: 9 open (3 std) at exit. ==544335== Open file descriptor 12: ==544335== at 0xEAEB22D: pipe (pipe.c:29) ==544335== by 0x188D707D: ??? ==544335== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==544335== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==544335== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==544335== by 0xF417D38: PetscInitialize (pinit.c:924) ==544335== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==544335== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==544335== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==544335== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==544335== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==544335== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==544335== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==544335== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==544335== ==544335== Open file descriptor 8: /dev/shm/open_mpi.0000 ==544335== at 0xEAEFBCC: __open_nocancel (open64_nocancel.c:39) ==544335== by 0xEA73C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==544335== by 0xE2FD822: ??? ==544335== by 0xE2FD96F: ??? ==544335== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==544335== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==544335== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==544335== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==544335== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==544335== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==544335== by 0xF417D38: PetscInitialize (pinit.c:924) ==544335== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==544335== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==544335== by 0x1E6038: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==544335== by 0x1DC313: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==544335== by 0x1DFC4E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==544335== by 0x1DFAEE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==544335== by 0x1E0185: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==544335== by 0x1DA600: main (TestOnLatticeSimulationWithPottsBasedCellPopulation.cpp:19) ==544335== ==544335== Open file descriptor 114: ==544335== ==544335== ==544335== Open file descriptor 111: ==544335== ==544335== ==544335== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestOnLatticeSimulationWithPottsBasedCellPopulation_valgrind.txt ==544335== ==544335== ==544335== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==544335== ==544335== ==544335== ==544335== HEAP SUMMARY: ==544335== in use at exit: 700,718 bytes in 9,375 blocks ==544335== total heap usage: 11,679,080 allocs, 11,669,705 frees, 2,227,740,468 bytes allocated ==544335== ==544335== LEAK SUMMARY: ==544335== definitely lost: 0 bytes in 0 blocks ==544335== indirectly lost: 0 bytes in 0 blocks ==544335== possibly lost: 0 bytes in 0 blocks ==544335== still reachable: 72 bytes in 4 blocks ==544335== suppressed: 700,646 bytes in 9,371 blocks ==544335== Reachable blocks (those to which a pointer was found) are not shown. ==544335== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==544335== ==544335== For lists of detected and suppressed errors, rerun with: -s ==544335== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)