==556657== Memcheck, a memory error detector ==556657== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==556657== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==556657== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestRunningVertexBasedSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==556657== Parent PID: 537925 ==556657== ==556657== ==556657== FILE DESCRIPTORS: 9 open (3 std) at exit. ==556657== Open file descriptor 12: ==556657== at 0xFF5E22D: pipe (pipe.c:29) ==556657== by 0x188D707D: ??? ==556657== by 0x13E3E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==556657== by 0xF781418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556657== by 0xF71AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556657== by 0xE3F1D38: PetscInitialize (pinit.c:924) ==556657== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==556657== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==556657== by 0x13418B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==556657== by 0x12DC6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==556657== by 0x13048A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==556657== by 0x13032B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==556657== by 0x1309C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==556657== by 0x12BFA0: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==556657== ==556657== Open file descriptor 8: /dev/shm/open_mpi.0000 ==556657== at 0xFF62BCC: __open_nocancel (open64_nocancel.c:39) ==556657== by 0xFEE6C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==556657== by 0xF67B822: ??? ==556657== by 0xF67B96F: ??? ==556657== by 0x13EE36DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==556657== by 0x13EE3938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==556657== by 0x13E99922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==556657== by 0x13E3E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==556657== by 0xF781418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556657== by 0xF71AD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==556657== by 0xE3F1D38: PetscInitialize (pinit.c:924) ==556657== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==556657== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==556657== by 0x13418B: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==556657== by 0x12DC6F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==556657== by 0x13048A: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==556657== by 0x13032B: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==556657== by 0x1309C1: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==556657== by 0x12BFA0: main (TestRunningVertexBasedSimulationsTutorial.cpp:19) ==556657== ==556657== Open file descriptor 114: ==556657== ==556657== ==556657== Open file descriptor 111: ==556657== ==556657== ==556657== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningVertexBasedSimulationsTutorial_valgrind.txt ==556657== ==556657== ==556657== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==556657== ==556657== ==556657== ==556657== HEAP SUMMARY: ==556657== in use at exit: 700,770 bytes in 9,378 blocks ==556657== total heap usage: 1,398,930 allocs, 1,389,552 frees, 1,413,254,640 bytes allocated ==556657== ==556657== LEAK SUMMARY: ==556657== definitely lost: 0 bytes in 0 blocks ==556657== indirectly lost: 0 bytes in 0 blocks ==556657== possibly lost: 0 bytes in 0 blocks ==556657== still reachable: 56 bytes in 3 blocks ==556657== suppressed: 700,714 bytes in 9,375 blocks ==556657== Reachable blocks (those to which a pointer was found) are not shown. ==556657== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==556657== ==556657== For lists of detected and suppressed errors, rerun with: -s ==556657== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)