==557941== Memcheck, a memory error detector ==557941== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==557941== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==557941== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestVanLeeuwen2009WntSwatCellCycleOdeSystem -malloc_debug -malloc_dump -memory_info ==557941== Parent PID: 537925 ==557941== ==557941== ==557941== FILE DESCRIPTORS: 9 open (3 std) at exit. ==557941== Open file descriptor 12: ==557941== at 0x119E622D: pipe (pipe.c:29) ==557941== by 0x1A1BA07D: ??? ==557941== by 0x1576E4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557941== by 0x112F2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557941== by 0x1128BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557941== by 0xFF80D38: PetscInitialize (pinit.c:924) ==557941== by 0xFDF258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557941== by 0xFDF25D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557941== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557941== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557941== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557941== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557941== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557941== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==557941== ==557941== Open file descriptor 8: /dev/shm/open_mpi.0000 ==557941== at 0x119EABCC: __open_nocancel (open64_nocancel.c:39) ==557941== by 0x1196EC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==557941== by 0xFE2A822: ??? ==557941== by 0xFE2A96F: ??? ==557941== by 0x158136DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557941== by 0x15813938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557941== by 0x157C9922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==557941== by 0x1576E2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==557941== by 0x112F2418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557941== by 0x1128BD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==557941== by 0xFF80D38: PetscInitialize (pinit.c:924) ==557941== by 0xFDF258B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==557941== by 0xFDF25D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==557941== by 0x1412CF: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==557941== by 0x13A4FF: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==557941== by 0x13D44E: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==557941== by 0x13D2EE: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==557941== by 0x13D985: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==557941== by 0x138830: main (TestVanLeeuwen2009WntSwatCellCycleOdeSystem.cpp:19) ==557941== ==557941== Open file descriptor 114: ==557941== ==557941== ==557941== Open file descriptor 111: ==557941== ==557941== ==557941== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestVanLeeuwen2009WntSwatCellCycleOdeSystem_valgrind.txt ==557941== ==557941== ==557941== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==557941== ==557941== ==557941== ==557941== HEAP SUMMARY: ==557941== in use at exit: 700,754 bytes in 9,377 blocks ==557941== total heap usage: 520,704 allocs, 511,327 frees, 1,562,086,740 bytes allocated ==557941== ==557941== LEAK SUMMARY: ==557941== definitely lost: 0 bytes in 0 blocks ==557941== indirectly lost: 0 bytes in 0 blocks ==557941== possibly lost: 0 bytes in 0 blocks ==557941== still reachable: 24 bytes in 2 blocks ==557941== suppressed: 700,730 bytes in 9,375 blocks ==557941== Reachable blocks (those to which a pointer was found) are not shown. ==557941== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==557941== ==557941== For lists of detected and suppressed errors, rerun with: -s ==557941== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)