==584953== Memcheck, a memory error detector ==584953== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==584953== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==584953== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==584953== Parent PID: 583813 ==584953== ==584953== ==584953== FILE DESCRIPTORS: 9 open (3 std) at exit. ==584953== Open file descriptor 12: ==584953== at 0xE1E722D: pipe (pipe.c:29) ==584953== by 0x188D807D: ??? ==584953== by 0x12E274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==584953== by 0xDE38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584953== by 0xDDD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584953== by 0xCAA8D38: PetscInitialize (pinit.c:924) ==584953== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==584953== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==584953== by 0x1241EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==584953== by 0x11E3FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==584953== by 0x1208DE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==584953== by 0x1207DA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==584953== by 0x120DED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==584953== by 0x11CC00: main (TestCellSrn.cpp:18) ==584953== ==584953== Open file descriptor 8: /dev/shm/open_mpi.0000 ==584953== at 0xE1EBBCC: __open_nocancel (open64_nocancel.c:39) ==584953== by 0xE16FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==584953== by 0xDD32822: ??? ==584953== by 0xDD3296F: ??? ==584953== by 0x12ECC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==584953== by 0x12ECC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==584953== by 0x12E82922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==584953== by 0x12E272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==584953== by 0xDE38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584953== by 0xDDD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584953== by 0xCAA8D38: PetscInitialize (pinit.c:924) ==584953== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==584953== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==584953== by 0x1241EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==584953== by 0x11E3FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==584953== by 0x1208DE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==584953== by 0x1207DA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==584953== by 0x120DED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==584953== by 0x11CC00: main (TestCellSrn.cpp:18) ==584953== ==584953== Open file descriptor 114: ==584953== ==584953== ==584953== Open file descriptor 111: ==584953== ==584953== ==584953== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==584953== ==584953== ==584953== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==584953== ==584953== ==584953== ==584953== HEAP SUMMARY: ==584953== in use at exit: 700,834 bytes in 9,379 blocks ==584953== total heap usage: 64,901 allocs, 55,522 frees, 1,354,343,520 bytes allocated ==584953== ==584953== LEAK SUMMARY: ==584953== definitely lost: 0 bytes in 0 blocks ==584953== indirectly lost: 0 bytes in 0 blocks ==584953== possibly lost: 0 bytes in 0 blocks ==584953== still reachable: 120 bytes in 4 blocks ==584953== suppressed: 700,714 bytes in 9,375 blocks ==584953== Reachable blocks (those to which a pointer was found) are not shown. ==584953== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==584953== ==584953== For lists of detected and suppressed errors, rerun with: -s ==584953== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)