==584937== Memcheck, a memory error detector ==584937== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==584937== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==584937== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCell -malloc_debug -malloc_dump -memory_info ==584937== Parent PID: 583813 ==584937== ==584937== ==584937== FILE DESCRIPTORS: 9 open (3 std) at exit. ==584937== Open file descriptor 12: ==584937== at 0xE1E722D: pipe (pipe.c:29) ==584937== by 0x188D807D: ??? ==584937== by 0x12E274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==584937== by 0xDE38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584937== by 0xDDD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584937== by 0xCAA8D38: PetscInitialize (pinit.c:924) ==584937== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==584937== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==584937== by 0x1339D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==584937== by 0x12D06F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==584937== by 0x130082: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==584937== by 0x12FF22: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==584937== by 0x1305B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==584937== by 0x12B3A0: main (TestCell.cpp:19) ==584937== ==584937== Open file descriptor 8: /dev/shm/open_mpi.0000 ==584937== at 0xE1EBBCC: __open_nocancel (open64_nocancel.c:39) ==584937== by 0xE16FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==584937== by 0xDD32822: ??? ==584937== by 0xDD3296F: ??? ==584937== by 0x12ECC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==584937== by 0x12ECC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==584937== by 0x12E82922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==584937== by 0x12E272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==584937== by 0xDE38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584937== by 0xDDD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==584937== by 0xCAA8D38: PetscInitialize (pinit.c:924) ==584937== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==584937== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==584937== by 0x1339D7: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==584937== by 0x12D06F: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==584937== by 0x130082: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==584937== by 0x12FF22: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==584937== by 0x1305B9: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==584937== by 0x12B3A0: main (TestCell.cpp:19) ==584937== ==584937== Open file descriptor 114: ==584937== ==584937== ==584937== Open file descriptor 111: ==584937== ==584937== ==584937== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCell_valgrind.txt ==584937== ==584937== ==584937== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==584937== ==584937== ==584937== ==584937== HEAP SUMMARY: ==584937== in use at exit: 700,830 bytes in 9,375 blocks ==584937== total heap usage: 5,184,955 allocs, 5,175,580 frees, 1,834,045,184 bytes allocated ==584937== ==584937== LEAK SUMMARY: ==584937== definitely lost: 0 bytes in 0 blocks ==584937== indirectly lost: 0 bytes in 0 blocks ==584937== possibly lost: 0 bytes in 0 blocks ==584937== still reachable: 184 bytes in 4 blocks ==584937== suppressed: 700,646 bytes in 9,371 blocks ==584937== Reachable blocks (those to which a pointer was found) are not shown. ==584937== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==584937== ==584937== For lists of detected and suppressed errors, rerun with: -s ==584937== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)