==604010== Memcheck, a memory error detector ==604010== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==604010== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==604010== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestCryptSimulation2dWithVertexBasedCellPopulation -malloc_debug -malloc_dump -memory_info ==604010== Parent PID: 583813 ==604010== ==604010== ==604010== FILE DESCRIPTORS: 9 open (3 std) at exit. ==604010== Open file descriptor 12: ==604010== at 0x1179A22D: pipe (pipe.c:29) ==604010== by 0x1A1BA07D: ??? ==604010== by 0x1571F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==604010== by 0x110A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604010== by 0x1103DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604010== by 0xFD34D38: PetscInitialize (pinit.c:924) ==604010== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==604010== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==604010== by 0x232E45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==604010== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==604010== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==604010== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==604010== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==604010== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==604010== ==604010== Open file descriptor 8: /dev/shm/open_mpi.0000 ==604010== at 0x1179EBCC: __open_nocancel (open64_nocancel.c:39) ==604010== by 0x11722C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==604010== by 0xFBDE822: ??? ==604010== by 0xFBDE96F: ??? ==604010== by 0x157C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==604010== by 0x157C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==604010== by 0x1577A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==604010== by 0x1571F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==604010== by 0x110A4418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604010== by 0x1103DD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604010== by 0xFD34D38: PetscInitialize (pinit.c:924) ==604010== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==604010== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==604010== by 0x232E45: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==604010== by 0x229013: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==604010== by 0x22CCD6: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==604010== by 0x22CB76: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==604010== by 0x22D20D: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==604010== by 0x227300: main (TestCryptSimulation2dWithVertexBasedCellPopulation.cpp:19) ==604010== ==604010== Open file descriptor 114: ==604010== ==604010== ==604010== Open file descriptor 111: ==604010== ==604010== ==604010== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCryptSimulation2dWithVertexBasedCellPopulation_valgrind.txt ==604010== ==604010== ==604010== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==604010== ==604010== ==604010== ==604010== HEAP SUMMARY: ==604010== in use at exit: 700,718 bytes in 9,374 blocks ==604010== total heap usage: 3,709,329 allocs, 3,699,955 frees, 1,636,103,946 bytes allocated ==604010== ==604010== LEAK SUMMARY: ==604010== definitely lost: 0 bytes in 0 blocks ==604010== indirectly lost: 0 bytes in 0 blocks ==604010== possibly lost: 0 bytes in 0 blocks ==604010== still reachable: 56 bytes in 3 blocks ==604010== suppressed: 700,662 bytes in 9,371 blocks ==604010== Reachable blocks (those to which a pointer was found) are not shown. ==604010== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==604010== ==604010== For lists of detected and suppressed errors, rerun with: -s ==604010== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)