==585578== Memcheck, a memory error detector ==585578== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==585578== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==585578== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestPeriodicNodeBasedCellPopulationParallelMethods -malloc_debug -malloc_dump -memory_info ==585578== Parent PID: 583813 ==585578== ==585578== ==585578== FILE DESCRIPTORS: 9 open (3 std) at exit. ==585578== Open file descriptor 12: ==585578== at 0xEAA722D: pipe (pipe.c:29) ==585578== by 0x188D707D: ??? ==585578== by 0x13EDC4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==585578== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==585578== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==585578== by 0xF417D38: PetscInitialize (pinit.c:924) ==585578== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==585578== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==585578== by 0x136C38: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==585578== by 0x13073D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==585578== by 0x132EE8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==585578== by 0x132DE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==585578== by 0x1333F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==585578== by 0x12EF40: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==585578== ==585578== Open file descriptor 8: /dev/shm/open_mpi.0000 ==585578== at 0xEAABBCC: __open_nocancel (open64_nocancel.c:39) ==585578== by 0xEA2FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==585578== by 0xE2FD822: ??? ==585578== by 0xE2FD96F: ??? ==585578== by 0x13F816DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==585578== by 0x13F81938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==585578== by 0x13F37922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==585578== by 0x13EDC2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==585578== by 0x10787418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==585578== by 0x10720D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==585578== by 0xF417D38: PetscInitialize (pinit.c:924) ==585578== by 0xE2C558B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==585578== by 0xE2C55D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==585578== by 0x136C38: PetscSetup::setUpWorld() (PetscSetupAndFinalize.hpp:61) ==585578== by 0x13073D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==585578== by 0x132EE8: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==585578== by 0x132DE4: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==585578== by 0x1333F7: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==585578== by 0x12EF40: main (TestPeriodicNodeBasedCellPopulationParallelMethods.cpp:18) ==585578== ==585578== Open file descriptor 114: ==585578== ==585578== ==585578== Open file descriptor 111: ==585578== ==585578== ==585578== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestPeriodicNodeBasedCellPopulationParallelMethods_valgrind.txt ==585578== ==585578== ==585578== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==585578== ==585578== ==585578== ==585578== HEAP SUMMARY: ==585578== in use at exit: 700,770 bytes in 9,378 blocks ==585578== total heap usage: 54,630 allocs, 45,252 frees, 1,353,856,075 bytes allocated ==585578== ==585578== LEAK SUMMARY: ==585578== definitely lost: 0 bytes in 0 blocks ==585578== indirectly lost: 0 bytes in 0 blocks ==585578== possibly lost: 0 bytes in 0 blocks ==585578== still reachable: 56 bytes in 3 blocks ==585578== suppressed: 700,714 bytes in 9,375 blocks ==585578== Reachable blocks (those to which a pointer was found) are not shown. ==585578== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==585578== ==585578== For lists of detected and suppressed errors, rerun with: -s ==585578== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)