==604449== Memcheck, a memory error detector ==604449== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==604449== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==604449== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/crypt/test/TestRunningMeshBasedCryptSimulationsTutorial -malloc_debug -malloc_dump -memory_info ==604449== Parent PID: 583813 ==604449== ==604449== ==604449== FILE DESCRIPTORS: 9 open (3 std) at exit. ==604449== Open file descriptor 12: ==604449== at 0x1175822D: pipe (pipe.c:29) ==604449== by 0x1A1BA07D: ??? ==604449== by 0x1571F4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==604449== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604449== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604449== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==604449== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==604449== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==604449== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==604449== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==604449== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==604449== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==604449== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==604449== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==604449== ==604449== Open file descriptor 8: /dev/shm/open_mpi.0000 ==604449== at 0x1175CBCC: __open_nocancel (open64_nocancel.c:39) ==604449== by 0x116E0C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==604449== by 0x10F5C822: ??? ==604449== by 0x10F5C96F: ??? ==604449== by 0x157C46DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==604449== by 0x157C4938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==604449== by 0x1577A922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==604449== by 0x1571F2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==604449== by 0x11062418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604449== by 0x10FFBD7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==604449== by 0xFCD2D38: PetscInitialize (pinit.c:924) ==604449== by 0xFBA658B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==604449== by 0xFBA65D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==604449== by 0x12B557: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==604449== by 0x12571D: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==604449== by 0x127B58: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==604449== by 0x127A54: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==604449== by 0x128067: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==604449== by 0x123F20: main (TestRunningMeshBasedCryptSimulationsTutorial.cpp:18) ==604449== ==604449== Open file descriptor 114: ==604449== ==604449== ==604449== Open file descriptor 111: ==604449== ==604449== ==604449== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestRunningMeshBasedCryptSimulationsTutorial_valgrind.txt ==604449== ==604449== ==604449== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==604449== ==604449== ==604449== ==604449== HEAP SUMMARY: ==604449== in use at exit: 700,786 bytes in 9,378 blocks ==604449== total heap usage: 1,753,961 allocs, 1,744,583 frees, 1,533,388,818 bytes allocated ==604449== ==604449== LEAK SUMMARY: ==604449== definitely lost: 0 bytes in 0 blocks ==604449== indirectly lost: 0 bytes in 0 blocks ==604449== possibly lost: 0 bytes in 0 blocks ==604449== still reachable: 56 bytes in 3 blocks ==604449== suppressed: 700,730 bytes in 9,375 blocks ==604449== Reachable blocks (those to which a pointer was found) are not shown. ==604449== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==604449== ==604449== For lists of detected and suppressed errors, rerun with: -s ==604449== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 40 from 40)