==630991== Memcheck, a memory error detector ==630991== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==630991== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==630991== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCellSrn -malloc_debug -malloc_dump -memory_info ==630991== Parent PID: 629821 ==630991== ==630991== ==630991== FILE DESCRIPTORS: 9 open (3 std) at exit. ==630991== Open file descriptor 12: ==630991== at 0xE1E722D: pipe (pipe.c:29) ==630991== by 0x188D807D: ??? ==630991== by 0x12E274CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==630991== by 0xDE38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630991== by 0xDDD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630991== by 0xCAA8D38: PetscInitialize (pinit.c:924) ==630991== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==630991== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==630991== by 0x1241EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==630991== by 0x11E3FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==630991== by 0x1208DE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==630991== by 0x1207DA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==630991== by 0x120DED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==630991== by 0x11CC00: main (TestCellSrn.cpp:18) ==630991== ==630991== Open file descriptor 8: /dev/shm/open_mpi.0000 ==630991== at 0xE1EBBCC: __open_nocancel (open64_nocancel.c:39) ==630991== by 0xE16FC4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==630991== by 0xDD32822: ??? ==630991== by 0xDD3296F: ??? ==630991== by 0x12ECC6DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630991== by 0x12ECC938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630991== by 0x12E82922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==630991== by 0x12E272DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==630991== by 0xDE38418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630991== by 0xDDD1D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==630991== by 0xCAA8D38: PetscInitialize (pinit.c:924) ==630991== by 0xC97A58B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==630991== by 0xC97A5D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==630991== by 0x1241EB: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==630991== by 0x11E3FD: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==630991== by 0x1208DE: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==630991== by 0x1207DA: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==630991== by 0x120DED: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==630991== by 0x11CC00: main (TestCellSrn.cpp:18) ==630991== ==630991== Open file descriptor 114: ==630991== ==630991== ==630991== Open file descriptor 111: ==630991== ==630991== ==630991== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCellSrn_valgrind.txt ==630991== ==630991== ==630991== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==630991== ==630991== ==630991== ==630991== HEAP SUMMARY: ==630991== in use at exit: 700,834 bytes in 9,379 blocks ==630991== total heap usage: 64,902 allocs, 55,523 frees, 1,354,343,719 bytes allocated ==630991== ==630991== LEAK SUMMARY: ==630991== definitely lost: 0 bytes in 0 blocks ==630991== indirectly lost: 0 bytes in 0 blocks ==630991== possibly lost: 0 bytes in 0 blocks ==630991== still reachable: 120 bytes in 4 blocks ==630991== suppressed: 700,714 bytes in 9,375 blocks ==630991== Reachable blocks (those to which a pointer was found) are not shown. ==630991== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==630991== ==630991== For lists of detected and suppressed errors, rerun with: -s ==630991== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 37 from 37)