==642530== Memcheck, a memory error detector ==642530== Copyright (C) 2002-2017, and GNU GPL'd, by Julian Seward et al. ==642530== Using Valgrind-3.18.1 and LibVEX; rerun with -h for copyright info ==642530== Command: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/cell_based/test/TestCreatingAndUsingANewSrnModelTutorial -malloc_debug -malloc_dump -memory_info ==642530== Parent PID: 629821 ==642530== ==642530== ==642530== FILE DESCRIPTORS: 9 open (3 std) at exit. ==642530== Open file descriptor 12: ==642530== at 0x101EC22D: pipe (pipe.c:29) ==642530== by 0x188D607D: ??? ==642530== by 0x13E8C4CB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==642530== by 0xFA0F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==642530== by 0xF9A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==642530== by 0xE69FD38: PetscInitialize (pinit.c:924) ==642530== by 0xE51158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==642530== by 0xE5115D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==642530== by 0x26C2AD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==642530== by 0x263357: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==642530== by 0x268010: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==642530== by 0x267EB1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==642530== by 0x268547: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==642530== by 0x25EE80: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==642530== ==642530== Open file descriptor 8: /dev/shm/open_mpi.0000 ==642530== at 0x101F0BCC: __open_nocancel (open64_nocancel.c:39) ==642530== by 0x10174C4F: shm_open@@GLIBC_2.34 (shm_open.c:40) ==642530== by 0xE549822: ??? ==642530== by 0xE54996F: ??? ==642530== by 0x13F316DC: ??? (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==642530== by 0x13F31938: opal_shmem_base_select (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==642530== by 0x13EE7922: opal_init (in /usr/lib/x86_64-linux-gnu/libopen-pal.so.40.30.2) ==642530== by 0x13E8C2DB: orte_init (in /usr/lib/x86_64-linux-gnu/libopen-rte.so.40.30.2) ==642530== by 0xFA0F418: ompi_mpi_init (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==642530== by 0xF9A8D7A: PMPI_Init_thread (in /usr/lib/x86_64-linux-gnu/libmpi.so.40.30.2) ==642530== by 0xE69FD38: PetscInitialize (pinit.c:924) ==642530== by 0xE51158B: PetscSetupUtils::InitialisePetsc() (PetscSetupUtils.cpp:80) ==642530== by 0xE5115D9: PetscSetupUtils::CommonSetup() (PetscSetupUtils.cpp:88) ==642530== by 0x26C2AD: PetscSetup::setUpWorld() (FakePetscSetup.hpp:70) ==642530== by 0x263357: CxxTest::RealWorldDescription::setUp() (RealDescriptions.cpp:266) ==642530== by 0x268010: CxxTest::TestRunner::runWorld() (TestRunner.h:43) ==642530== by 0x267EB1: CxxTest::TestRunner::runAllTests(CxxTest::TestListener&) (TestRunner.h:23) ==642530== by 0x268547: CxxTest::ErrorFormatter::run() (ErrorFormatter.h:47) ==642530== by 0x25EE80: main (TestCreatingAndUsingANewSrnModelTutorial.cpp:19) ==642530== ==642530== Open file descriptor 114: ==642530== ==642530== ==642530== Open file descriptor 111: ==642530== ==642530== ==642530== Open file descriptor 4: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/memtest/TestCreatingAndUsingANewSrnModelTutorial_valgrind.txt ==642530== ==642530== ==642530== Open file descriptor 3: /home/github/actions-runner/_work/Chaste/Chaste/Chaste/chaste-build-dir/Testing/Temporary/LastTest.log.tmp ==642530== ==642530== ==642530== ==642530== HEAP SUMMARY: ==642530== in use at exit: 700,702 bytes in 9,374 blocks ==642530== total heap usage: 3,812,332 allocs, 3,802,958 frees, 1,523,679,604 bytes allocated ==642530== ==642530== LEAK SUMMARY: ==642530== definitely lost: 0 bytes in 0 blocks ==642530== indirectly lost: 0 bytes in 0 blocks ==642530== possibly lost: 0 bytes in 0 blocks ==642530== still reachable: 56 bytes in 3 blocks ==642530== suppressed: 700,646 bytes in 9,371 blocks ==642530== Reachable blocks (those to which a pointer was found) are not shown. ==642530== To see them, rerun with: --leak-check=full --show-leak-kinds=all ==642530== ==642530== For lists of detected and suppressed errors, rerun with: -s ==642530== ERROR SUMMARY: 0 errors from 0 contexts (suppressed: 33 from 33)